RNA id: TU110134



Basic Information


Item Value
RNA id TU110134
length 203
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G88244
representative True

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 28811763 ~ 28811965 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ccagtctgtagctttgttttccccaatgtctgctgcttgaccttgttcttatgaaccgccgtctttgaaattttaaggatggaagcaacctgacgctcactgtatccctctgccagtaaagccagaattgaacccttcttttcctcaatcaaaactttccttttaaaCTCTTTGGcctggtcaatagttattttttgattcaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU110133 lncRNA downstream 26102 28785166 ~ 28785661 (-) True G88243
TU110131 lncRNA downstream 32053 28779343 ~ 28779710 (-) True G88241
TU110130 lncRNA downstream 33078 28778293 ~ 28778685 (-) True G88240
TU110118 lncRNA downstream 49791 28761196 ~ 28761972 (-) True G88228
TU110116 lncRNA downstream 113653 28697878 ~ 28698110 (-) True G88226
TU110135 lncRNA upstream 18193 28830158 ~ 28831224 (-) True G88245
TU110254 lncRNA upstream 467396 29279361 ~ 29280873 (-) True G88347
TU110362 lncRNA upstream 1026553 29838518 ~ 29841539 (-) True G88434
TU110368 lncRNA upstream 1076480 29888445 ~ 29947540 (-) True G88435
TU110503 lncRNA upstream 1613339 30425304 ~ 30425552 (-) True G88545
AMCG00021757 mRNA downstream 219961 28586176 ~ 28591802 (-) True AMCG00021757
AMCG00021756 mRNA downstream 572623 28234640 ~ 28239140 (-) True AMCG00021756
AMCG00021755 mRNA downstream 593048 28215822 ~ 28218715 (-) True AMCG00021755
AMCG00021747 mRNA downstream 1170854 27638582 ~ 27640909 (-) True AMCG00021747
AMCG00021744 mRNA downstream 1224624 27584420 ~ 27587139 (-) True AMCG00021744
AMCG00021767 mRNA upstream 231533 29043498 ~ 29047472 (-) True AMCG00021767
AMCG00021771 mRNA upstream 450487 29262452 ~ 29264433 (-) True AMCG00021771
AMCG00021770 mRNA upstream 456449 29268414 ~ 29271589 (-) True AMCG00021770
AMCG00021774 mRNA upstream 461127 29273092 ~ 29275349 (-) True AMCG00021774
AMCG00021773 mRNA upstream 469591 29281556 ~ 29285963 (-) True AMCG00021773
TU110132 other downstream 28482 28781802 ~ 28783281 (-) True G88242
TU109843 other downstream 1891919 26911474 ~ 26919844 (-) False AMCG00021723
TU109676 other downstream 2657388 26152105 ~ 26154375 (-) True G87871
TU109647 other downstream 2714979 26091254 ~ 26096784 (-) True AMCG00021700
TU109596 other downstream 2903758 25905444 ~ 25908005 (-) True G87806
TU110186 other upstream 257236 29069201 ~ 29071760 (-) True G88288
TU110330 other upstream 918112 29730077 ~ 29742808 (-) True G88405
TU110482 other upstream 1525618 30337583 ~ 30424612 (-) True G88527
TU110615 other upstream 2065883 30877848 ~ 30888212 (-) True AMCG00021820
TU110664 other upstream 2317618 31129583 ~ 31132185 (-) False AMCG00021830

Expression Profile