RNA id: TU110674



Basic Information


Item Value
RNA id TU110674
length 361
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G88677
representative True

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 31214309 ~ 31214669 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tggttgttcttctggaaggttctcctctctccacagagacacactggagctctgtcagagtgaccatcgggttcttggtcacctccctgactaaggcccttctcccccgatcgctcagtttggccgggcggccagctctaggaagagtcctggtggttccaaacttcttccatttacggatgatggaggccactgtgctcattgggaccttcaatgctgtagacatttttctgtacccttccctagatctgtgcctcgatacaatcctgtctcagcggtctacagacaattccttggacttcatggcttggtttgtgctctgacatacactgttaactgtgggaccttatatagacaggtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU110661 lncRNA upstream 82074 31130347 ~ 31132235 (+) True G88666
TU110644 lncRNA upstream 165780 31047803 ~ 31048529 (+) True G88655
TU110586 lncRNA upstream 483441 30727284 ~ 30730868 (+) True G88609
TU110466 lncRNA upstream 745389 30466903 ~ 30468920 (+) False AMCG00021802
TU110430 lncRNA upstream 956112 30256024 ~ 30258197 (+) True G88485
TU110746 lncRNA downstream 644166 31858835 ~ 31859037 (+) True G88741
TU110748 lncRNA downstream 645252 31859921 ~ 31860135 (+) True G88743
TU110752 lncRNA downstream 679798 31894467 ~ 31986530 (+) True G88746
TU110767 lncRNA downstream 774115 31988784 ~ 31989051 (+) True G88761
TU110780 lncRNA downstream 814289 32028958 ~ 32029166 (+) True G88771
AMCG00021825 mRNA upstream 57995 31078184 ~ 31156314 (+) True AMCG00021825
AMCG00021821 mRNA upstream 175237 31028446 ~ 31039072 (+) True AMCG00021821
AMCG00021822 mRNA upstream 336469 30863262 ~ 30877840 (+) True AMCG00021822
AMCG00021824 mRNA upstream 416320 30797240 ~ 30797989 (+) True AMCG00021824
AMCG00021814 mRNA upstream 461045 30744604 ~ 30753264 (+) True AMCG00021814
AMCG00021832 mRNA downstream 39525 31254194 ~ 31255057 (+) True AMCG00021832
AMCG00021833 mRNA downstream 155429 31370098 ~ 31404802 (+) True AMCG00021833
AMCG00021835 mRNA downstream 204837 31419506 ~ 31445655 (+) True AMCG00021835
AMCG00021839 mRNA downstream 368372 31583041 ~ 31584257 (+) True AMCG00021839
AMCG00021836 mRNA downstream 420501 31635170 ~ 31652999 (+) True AMCG00021836
TU110433 other upstream 820088 30267402 ~ 30394221 (+) False AMCG00021803
TU110432 other upstream 820088 30388837 ~ 30394221 (+) False AMCG00021803
TU110265 other upstream 1832036 29378575 ~ 29382273 (+) False AMCG00021779
TU110267 other upstream 1832036 29378575 ~ 29382273 (+) False AMCG00021779
TU110172 other upstream 2148970 29060887 ~ 29065339 (+) True G88276
TU111156 other downstream 3711884 34926553 ~ 35041288 (+) False AMCG00021881
TU111160 other downstream 3823170 35037839 ~ 35041288 (+) False AMCG00021881
TU111226 other downstream 3996464 35211133 ~ 35263537 (+) True G89142
TU111415 other downstream 4749902 35964571 ~ 35967384 (+) False G89299
TU111425 other downstream 4749902 35964571 ~ 35967384 (+) True G89299

Expression Profile