RNA id: TU110767


Basic Information

Item Value
RNA id TU110767
length 268
lncRNA type inter_gene
GC content 0.60
exon number 1
gene id G88761
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 31988784 ~ 31989051 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GGCGAACTGGCTGCGACATCTGTAACTCCCCATTGATCGCTAAGGTTGATTCGGCTGATCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCATCCTCCATGGGCGTCCCTCCCGAAGCCCCGCGCTCGGTGGCAGAGGACCGGTCACCGGGAACGAGTAGCTGCTCCCCTGCTAAGAATCTCCAAACAGACGTAATTGTAGGAGAGCCAAGCTCCGAGAGTCCACACACATCTGAGTCCGGCGCTGCACGGGGCAGTCTGCCTTTCTTTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU110752 lncRNA upstream 2254 31894467 ~ 31986530 (+) True G88746
TU110748 lncRNA upstream 128649 31859921 ~ 31860135 (+) True G88743
TU110746 lncRNA upstream 129747 31858835 ~ 31859037 (+) True G88741
TU110674 lncRNA upstream 774115 31214309 ~ 31214669 (+) True G88677
TU110661 lncRNA upstream 856549 31130347 ~ 31132235 (+) True G88666
TU110780 lncRNA downstream 39907 32028958 ~ 32029166 (+) True G88771
TU110786 lncRNA downstream 76232 32065283 ~ 32067407 (+) True G88776
TU110850 lncRNA downstream 816267 32805318 ~ 32805877 (+) True G88833
TU110855 lncRNA downstream 888348 32877399 ~ 32877672 (+) True G88838
TU110886 lncRNA downstream 1721723 33710774 ~ 33711053 (+) True G88867
AMCG00021840 mRNA upstream 7756 31954587 ~ 31981028 (+) True AMCG00021840
AMCG00021841 mRNA upstream 117759 31870072 ~ 31871025 (+) True AMCG00021841
AMCG00021837 mRNA upstream 225781 31755353 ~ 31763003 (+) True AMCG00021837
AMCG00021834 mRNA upstream 277707 31704641 ~ 31711077 (+) True AMCG00021834
AMCG00021838 mRNA upstream 312384 31673034 ~ 31676400 (+) True AMCG00021838
AMCG00021842 mRNA downstream 70065 32059116 ~ 32065047 (+) True AMCG00021842
AMCG00021843 mRNA downstream 93083 32082134 ~ 32092685 (+) True AMCG00021843
AMCG00021850 mRNA downstream 149521 32138572 ~ 32146026 (+) True AMCG00021850
AMCG00021844 mRNA downstream 204226 32193277 ~ 32219473 (+) True AMCG00021844
AMCG00021851 mRNA downstream 429250 32418301 ~ 32433938 (+) True AMCG00021851
TU110433 other upstream 1594563 30267402 ~ 30394221 (+) False AMCG00021803
TU110432 other upstream 1594563 30388837 ~ 30394221 (+) False AMCG00021803
TU110265 other upstream 2606511 29378575 ~ 29382273 (+) False AMCG00021779
TU110267 other upstream 2606511 29378575 ~ 29382273 (+) False AMCG00021779
TU110172 other upstream 2923445 29060887 ~ 29065339 (+) True G88276
TU111156 other downstream 2937502 34926553 ~ 35041288 (+) False AMCG00021881
TU111160 other downstream 3048788 35037839 ~ 35041288 (+) False AMCG00021881
TU111226 other downstream 3222082 35211133 ~ 35263537 (+) True G89142
TU111415 other downstream 3975520 35964571 ~ 35967384 (+) False G89299
TU111425 other downstream 3975520 35964571 ~ 35967384 (+) True G89299

Expression Profile