RNA id: TU110901


Basic Information

Item Value
RNA id TU110901
length 245
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G88882
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 33845096 ~ 33845340 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTATCtcacaatgtgctgtcatggtttaaatcatatctgtcaaacagactccaatatgtacagattaacgagaaccactcaaatttaactgaggttaagtacggagtcccacagggctcagtcctcggacctatacttttttcattgtacatgctccctttaggtgatatcattcgacgacataatattaactttcacagttacgcagacgacacacaattatatctgtcagtaaatcctaacaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU110891 lncRNA upstream 83622 33761243 ~ 33761474 (+) True G88872
TU110886 lncRNA upstream 134043 33710774 ~ 33711053 (+) True G88867
TU110855 lncRNA upstream 967424 32877399 ~ 32877672 (+) True G88838
TU110850 lncRNA upstream 1039219 32805318 ~ 32805877 (+) True G88833
TU110786 lncRNA upstream 1777689 32065283 ~ 32067407 (+) True G88776
TU110903 lncRNA downstream 66080 33911420 ~ 33911775 (+) True G88884
TU110906 lncRNA downstream 113255 33958595 ~ 33959180 (+) True G88887
TU110949 lncRNA downstream 310081 34155421 ~ 34155966 (+) True G88927
TU110959 lncRNA downstream 331049 34176389 ~ 34176706 (+) True G88937
TU110960 lncRNA downstream 331614 34176954 ~ 34177478 (+) True G88938
AMCG00021858 mRNA upstream 23010 33810474 ~ 33822086 (+) True AMCG00021858
AMCG00021855 mRNA upstream 258596 33548596 ~ 33586500 (+) True AMCG00021855
AMCG00021856 mRNA upstream 307186 33475168 ~ 33537910 (+) True AMCG00021856
AMCG00021854 mRNA upstream 391443 33435316 ~ 33453653 (+) True AMCG00021854
AMCG00021857 mRNA upstream 449871 33382419 ~ 33395225 (+) True AMCG00021857
AMCG00021859 mRNA downstream 429326 34274666 ~ 34286319 (+) True AMCG00021859
AMCG00021862 mRNA downstream 459609 34304949 ~ 34323922 (+) True AMCG00021862
AMCG00021869 mRNA downstream 561509 34406849 ~ 34413209 (+) True AMCG00021869
AMCG00021876 mRNA downstream 751576 34596916 ~ 34607621 (+) True AMCG00021876
AMCG00021873 mRNA downstream 779708 34625048 ~ 34678756 (+) True AMCG00021873
TU110433 other upstream 3450875 30267402 ~ 30394221 (+) False AMCG00021803
TU110432 other upstream 3450875 30388837 ~ 30394221 (+) False AMCG00021803
TU110265 other upstream 4462823 29378575 ~ 29382273 (+) False AMCG00021779
TU110267 other upstream 4462823 29378575 ~ 29382273 (+) False AMCG00021779
TU110172 other upstream 4779757 29060887 ~ 29065339 (+) True G88276
TU111156 other downstream 1081213 34926553 ~ 35041288 (+) False AMCG00021881
TU111160 other downstream 1192499 35037839 ~ 35041288 (+) False AMCG00021881
TU111226 other downstream 1365793 35211133 ~ 35263537 (+) True G89142
TU111415 other downstream 2119231 35964571 ~ 35967384 (+) False G89299
TU111425 other downstream 2119231 35964571 ~ 35967384 (+) True G89299

Expression Profile