RNA id: TU111375



Basic Information


Item Value
RNA id TU111375
length 256
lncRNA type inter_gene
GC content 0.56
exon number 1
gene id G89272
representative True

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 35817366 ~ 35817621 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gtggcttccgtctggccactctaccatacaggcctgattggtggagtgctgcagagatggttgttcttctggaaggttctcctctctccacagagacacgctggagctctgtcagagtgaccatcggtttcttggtcacctccctgactaaggcccttctcccccgatcgctcagtttggccgggcggccagctctaggaagagtcctggtggttccaaacttcttccatttacggatgatggaggccactgtgct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU111367 lncRNA downstream 105650 35711463 ~ 35711716 (-) True G89264
TU111347 lncRNA downstream 362168 35454567 ~ 35455198 (-) True G89247
TU111340 lncRNA downstream 412026 35405057 ~ 35405340 (-) True G89240
TU111310 lncRNA downstream 446886 35370106 ~ 35370480 (-) True G89212
TU111206 lncRNA downstream 736193 35079573 ~ 35081173 (-) True G89130
TU111491 lncRNA upstream 34415 35852036 ~ 35893714 (-) True G89359
TU111511 lncRNA upstream 149498 35967119 ~ 35985261 (-) True G89373
TU111572 lncRNA upstream 680573 36498194 ~ 36501828 (-) True G89428
TU111576 lncRNA upstream 693978 36511599 ~ 36511931 (-) True G89431
TU111584 lncRNA upstream 706888 36524509 ~ 36537711 (-) True AMCG00021896
AMCG00021890 mRNA downstream 18259 35798190 ~ 35799107 (-) True AMCG00021890
AMCG00021888 mRNA downstream 76856 35727419 ~ 35740510 (-) True AMCG00021888
AMCG00021889 mRNA downstream 144843 35668304 ~ 35672523 (-) True AMCG00021889
AMCG00021885 mRNA downstream 465733 35311289 ~ 35351633 (-) True AMCG00021885
AMCG00021877 mRNA downstream 996987 34811156 ~ 34820379 (-) True AMCG00021877
AMCG00021887 mRNA upstream 110970 35928591 ~ 35950291 (-) True AMCG00021887
AMCG00021891 mRNA upstream 209659 36027280 ~ 36030435 (-) True AMCG00021891
AMCG00021892 mRNA upstream 237353 36054974 ~ 36058550 (-) True AMCG00021892
AMCG00021895 mRNA upstream 597258 36414879 ~ 36417745 (-) True AMCG00021895
AMCG00021896 mRNA upstream 707265 36524886 ~ 36537718 (-) False AMCG00021896
TU111315 other downstream 421595 35375016 ~ 35395771 (-) True G89217
TU111038 other downstream 1437071 34346988 ~ 34380295 (-) False G89004
TU111040 other downstream 1466241 34346988 ~ 34351125 (-) True G89004
TU110795 other downstream 3747902 32063385 ~ 32069464 (-) True AMCG00021849
TU110664 other downstream 4685181 31129583 ~ 31132185 (-) False AMCG00021830
TU111504 other upstream 126131 35943752 ~ 35946984 (-) True G89368
TU111563 other upstream 597418 36415039 ~ 36438350 (-) False AMCG00021895
TU111619 other upstream 860906 36678527 ~ 36687642 (-) False AMCG00021897
TU111771 other upstream 2443766 38261387 ~ 38283855 (-) True G89598
TU111784 other upstream 2577950 38395571 ~ 38397755 (-) True G89611

Expression Profile