RNA id: TU111576



Basic Information


Item Value
RNA id TU111576
length 333
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G89431
representative True

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 36511599 ~ 36511931 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gtCTTATTTTTTACAGAGATAACCATGGTAATTTCCCAAATAGTCTGCGTCTTTTTGCGGGGTGGTCTCTCTGTGGAGTTTCGGGTGGGGCAACGGCCCCCTCCAGTGAGATAAACTCTGGATCAGGAGAAATAGGATATCTATCTCTAGTAGGGGCCATTTTTAGTTTCTCCAATAACTCCCGGTTAACTCTGTTGGAGAAAACCGGGGATATTAATCTCGGCCATAGCGGTCATAAAACTCCCCAAACCTTTCGGTGTCCTGCCTGAGGccagtgtgtgctgctgtgtgacagCCCTGACCAGATCTATGACATGAGACCCGCGGATAGGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU111572 lncRNA downstream 9771 36498194 ~ 36501828 (-) True G89428
TU111511 lncRNA downstream 526338 35967119 ~ 35985261 (-) True G89373
TU111491 lncRNA downstream 617885 35852036 ~ 35893714 (-) True G89359
TU111375 lncRNA downstream 693978 35817366 ~ 35817621 (-) True G89272
TU111367 lncRNA downstream 799883 35711463 ~ 35711716 (-) True G89264
TU111584 lncRNA upstream 12578 36524509 ~ 36537711 (-) True AMCG00021896
TU111707 lncRNA upstream 746612 37258543 ~ 37258818 (-) True G89539
TU111717 lncRNA upstream 954850 37466781 ~ 37467591 (-) True G89549
TU111721 lncRNA upstream 1053043 37564974 ~ 37565215 (-) True G89553
TU111727 lncRNA upstream 1102466 37614397 ~ 37614596 (-) True G89559
AMCG00021895 mRNA downstream 93854 36414879 ~ 36417745 (-) True AMCG00021895
AMCG00021892 mRNA downstream 453049 36054974 ~ 36058550 (-) True AMCG00021892
AMCG00021891 mRNA downstream 481164 36027280 ~ 36030435 (-) True AMCG00021891
AMCG00021887 mRNA downstream 561308 35928591 ~ 35950291 (-) True AMCG00021887
AMCG00021890 mRNA downstream 712492 35798190 ~ 35799107 (-) True AMCG00021890
AMCG00021896 mRNA upstream 12955 36524886 ~ 36537718 (-) False AMCG00021896
AMCG00021898 mRNA upstream 110600 36622531 ~ 36625236 (-) True AMCG00021898
AMCG00021897 mRNA upstream 165175 36677106 ~ 36687637 (-) True AMCG00021897
AMCG00021902 mRNA upstream 324497 36836428 ~ 36845633 (-) True AMCG00021902
AMCG00021901 mRNA upstream 355912 36867843 ~ 36874210 (-) True AMCG00021901
TU111563 other downstream 73249 36415039 ~ 36438350 (-) False AMCG00021895
TU111504 other downstream 564615 35943752 ~ 35946984 (-) True G89368
TU111315 other downstream 1115828 35375016 ~ 35395771 (-) True G89217
TU111038 other downstream 2131304 34346988 ~ 34380295 (-) False G89004
TU111619 other upstream 166596 36678527 ~ 36687642 (-) False AMCG00021897
TU111771 other upstream 1749456 38261387 ~ 38283855 (-) True G89598
TU111784 other upstream 1883640 38395571 ~ 38397755 (-) True G89611
TU111863 other upstream 2743948 39255879 ~ 39259804 (-) False AMCG00021918
TU111960 other upstream 2973902 39485833 ~ 39486288 (-) True G89765

Expression Profile