RNA id: TU111735



Basic Information


Item Value
RNA id TU111735
length 334
lncRNA type inter_gene
GC content 0.29
exon number 1
gene id G89567
representative True

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 37942347 ~ 37942680 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


atctttaacaaccactttgttggttttgctaggctagataaagctaatttgctcagtctgtatacaagccatttctaatgctaacatcaatataaaacattatataattatcacaaaacactttcttcaactttcctatacagagtcttcattatgtacatgtgcttttttgttttttattttaaataaatttgcaaagatttcaaacaaacttctttcacgttgtcattatggggtattgtttgtagaattttgaggaaaataatgaatttaatccattttggaataaggctgtaacataacaaaatgtggaaaaagtgaagcgctgtgaata

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU111734 lncRNA downstream 49335 37892794 ~ 37893012 (-) True G89566
TU111733 lncRNA downstream 123578 37818562 ~ 37818769 (-) True G89565
TU111730 lncRNA downstream 181326 37760817 ~ 37761021 (-) True G89562
TU111727 lncRNA downstream 327751 37614397 ~ 37614596 (-) True G89559
TU111721 lncRNA downstream 377132 37564974 ~ 37565215 (-) True G89553
TU111738 lncRNA upstream 37409 37980089 ~ 37980414 (-) True G89570
TU111754 lncRNA upstream 192580 38135260 ~ 38151050 (-) True G89584
TU111758 lncRNA upstream 210548 38153228 ~ 38153513 (-) True G89587
TU111759 lncRNA upstream 212080 38154760 ~ 38155121 (-) True G89588
TU111782 lncRNA upstream 406543 38349223 ~ 38349555 (-) True G89609
AMCG00021906 mRNA downstream 707506 37212616 ~ 37234841 (-) True AMCG00021906
AMCG00021905 mRNA downstream 770968 37091198 ~ 37171379 (-) True AMCG00021905
AMCG00021904 mRNA downstream 942707 36992851 ~ 36999640 (-) True AMCG00021904
AMCG00021903 mRNA downstream 967231 36944033 ~ 36975116 (-) True AMCG00021903
AMCG00021901 mRNA downstream 1068137 36867843 ~ 36874210 (-) True AMCG00021901
AMCG00021907 mRNA upstream 15075 37957755 ~ 37958533 (-) True AMCG00021907
AMCG00021909 mRNA upstream 237400 38180080 ~ 38224604 (-) True AMCG00021909
AMCG00021908 mRNA upstream 295458 38238138 ~ 38245037 (-) True AMCG00021908
AMCG00021913 mRNA upstream 876731 38819411 ~ 38826295 (-) True AMCG00021913
AMCG00021921 mRNA upstream 995927 38938607 ~ 38945501 (-) True AMCG00021921
TU111619 other downstream 1254705 36678527 ~ 36687642 (-) False AMCG00021897
TU111563 other downstream 1503997 36415039 ~ 36438350 (-) False AMCG00021895
TU111504 other downstream 1995363 35943752 ~ 35946984 (-) True G89368
TU111315 other downstream 2546576 35375016 ~ 35395771 (-) True G89217
TU111040 other downstream 3591222 34346988 ~ 34351125 (-) True G89004
TU111771 other upstream 318707 38261387 ~ 38283855 (-) True G89598
TU111784 other upstream 452891 38395571 ~ 38397755 (-) True G89611
TU111863 other upstream 1313199 39255879 ~ 39259804 (-) False AMCG00021918
TU111960 other upstream 1543153 39485833 ~ 39486288 (-) True G89765

Expression Profile