RNA id: TU111753



Basic Information


Item Value
RNA id TU111753
length 298
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G89583
representative True

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 38154835 ~ 38155132 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TACCACGTGGGCAGTTCTAGAGTGTCCTCTAGAGCACAAACAGTGTATCGTGCCTACAAAAGTTTTCTTGTTTCAAAACTTTGGAATCTGGATTTCTGGACAAAGCTATCCAATAACTATTACAGAAATAAGTTATTTTCAGTCTAAGTTTCCTCACACGGGGCACCAattatgtagcgtaaggtacacttataaatttcaatttaagaagtgaatttatagtatcaccttatcacgaatcctggaatcttgtagaactcaatttctgtaataattggacacagacaccaattccaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU111740 lncRNA upstream 95301 38017304 ~ 38059534 (+) True G89571
TU111739 lncRNA upstream 100306 38017304 ~ 38054529 (+) False G89571
TU111722 lncRNA upstream 552171 37602437 ~ 37602664 (+) True G89554
TU111720 lncRNA upstream 589620 37564974 ~ 37565215 (+) True G89552
TU111706 lncRNA upstream 896000 37258561 ~ 37258835 (+) True G89538
TU111749 lncRNA downstream 3421 38158553 ~ 38161634 (+) True G89579
TU111770 lncRNA downstream 93782 38248914 ~ 38250240 (+) True G89597
TU111780 lncRNA downstream 227560 38382692 ~ 38382955 (+) True G89607
TU111781 lncRNA downstream 263789 38418921 ~ 38419128 (+) True G89608
TU111779 lncRNA downstream 269278 38424410 ~ 38425293 (+) True G89606
AMCG00021910 mRNA upstream 12676 38137122 ~ 38142159 (+) True AMCG00021910
AMCG00021911 mRNA upstream 33263 38120324 ~ 38121572 (+) True AMCG00021911
AMCG00021900 mRNA upstream 1497114 36650232 ~ 36657721 (+) False AMCG00021900
AMCG00021899 mRNA upstream 1653007 36465786 ~ 36501828 (+) True AMCG00021899
AMCG00021893 mRNA upstream 2141180 35984055 ~ 36013655 (+) True AMCG00021893
AMCG00021912 mRNA downstream 240674 38395806 ~ 38397674 (+) True AMCG00021912
AMCG00021914 mRNA downstream 700694 38855826 ~ 38865619 (+) True AMCG00021914
AMCG00021915 mRNA downstream 1203586 39358718 ~ 39369622 (+) True AMCG00021915
AMCG00021927 mRNA downstream 1305127 39460259 ~ 39461475 (+) True AMCG00021927
TU111747 other upstream 3786 38121257 ~ 38151049 (+) True G89578
TU111748 other upstream 3786 38121257 ~ 38151049 (+) False G89578
TU111415 other upstream 2187451 35964571 ~ 35967384 (+) False G89299
TU111425 other upstream 2187451 35964571 ~ 35967384 (+) True G89299
TU111226 other upstream 2891298 35211133 ~ 35263537 (+) True G89142
TU111805 other downstream 662740 38817872 ~ 38822685 (+) True G89632
TU111914 other downstream 1245392 39400524 ~ 39408261 (+) True G89728

Expression Profile