RNA id: TU111901



Basic Information


Item Value
RNA id TU111901
length 201
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G89716
representative True

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 39333925 ~ 39334125 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tggaaccttatcagaagctttttggaaatctaagtatatcatatcatatgttttcacatgatctacagctgcagttgcatgttcaaaaaattctaataaattagtaagacatgatctgcctcatctaaacccatgttgactatctccaagaatatggttttcattgagatgctcctctattttctgtctaatcattttttc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU111830 lncRNA downstream 394101 38939562 ~ 38939824 (-) True G89657
TU111804 lncRNA downstream 516775 38816944 ~ 38817150 (-) True G89631
TU111803 lncRNA downstream 689887 38643828 ~ 38644038 (-) True G89630
TU111798 lncRNA downstream 842340 38491335 ~ 38491585 (-) True G89625
TU111791 lncRNA downstream 908485 38422700 ~ 38425440 (-) True G89618
TU111908 lncRNA upstream 49524 39383649 ~ 39385676 (-) True G89723
TU111909 lncRNA upstream 51693 39385818 ~ 39386082 (-) True G89724
TU111943 lncRNA upstream 128350 39462475 ~ 39462921 (-) True G89748
TU111944 lncRNA upstream 130307 39464432 ~ 39465633 (-) True G89749
TU111946 lncRNA upstream 134640 39468765 ~ 39470104 (-) True G89751
AMCG00021916 mRNA downstream 48123 39283270 ~ 39285802 (-) True AMCG00021916
AMCG00021918 mRNA downstream 57869 39255881 ~ 39276056 (-) True AMCG00021918
AMCG00021917 mRNA downstream 99489 39209015 ~ 39234436 (-) True AMCG00021917
AMCG00021919 mRNA downstream 141243 39190898 ~ 39192682 (-) True AMCG00021919
AMCG00021920 mRNA downstream 281252 39044785 ~ 39052673 (-) True AMCG00021920
AMCG00021922 mRNA upstream 37681 39371806 ~ 39373457 (-) True AMCG00021922
AMCG00021926 mRNA upstream 86132 39420257 ~ 39423376 (-) True AMCG00021926
AMCG00021923 mRNA upstream 110363 39444488 ~ 39448728 (-) True AMCG00021923
AMCG00021925 mRNA upstream 141851 39475976 ~ 39479016 (-) True AMCG00021925
AMCG00021924 mRNA upstream 154356 39488481 ~ 39548802 (-) True AMCG00021924
TU111863 other downstream 74121 39255879 ~ 39259804 (-) False AMCG00021918
TU111784 other downstream 936170 38395571 ~ 38397755 (-) True G89611
TU111771 other downstream 1050070 38261387 ~ 38283855 (-) True G89598
TU111619 other downstream 2646283 36678527 ~ 36687642 (-) False AMCG00021897
TU111563 other downstream 2895575 36415039 ~ 36438350 (-) False AMCG00021895
TU111960 other upstream 151708 39485833 ~ 39486288 (-) True G89765

Expression Profile