RNA id: TU111975


Basic Information

Item Value
RNA id TU111975
length 206
lncRNA type intronic
GC content 0.38
exon number 1
gene id G89776
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 39545941 ~ 39546146 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

aattagtaagacatgatctgcctcgtctaaacccatgttgactatctccaagaatatggttttcattaagatgctcctctattttctgtctaataattttttccaacattttacaagtgatgcaggtgagactgattggtctgtaatttcctggctcagttttgtcccctttcttgtggattggtatgacatttgctgtcttccag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU111971 lncRNA downstream 56908 39486897 ~ 39489033 (-) False AMCG00021924
TU111946 lncRNA downstream 75837 39468765 ~ 39470104 (-) True G89751
TU111944 lncRNA downstream 80308 39464432 ~ 39465633 (-) True G89749
TU111943 lncRNA downstream 83020 39462475 ~ 39462921 (-) True G89748
TU111909 lncRNA downstream 159859 39385818 ~ 39386082 (-) True G89724
AMCG00021925 mRNA downstream 66925 39475976 ~ 39479016 (-) True AMCG00021925
AMCG00021923 mRNA downstream 97213 39444488 ~ 39448728 (-) True AMCG00021923
AMCG00021926 mRNA downstream 122565 39420257 ~ 39423376 (-) True AMCG00021926
AMCG00021922 mRNA downstream 172484 39371806 ~ 39373457 (-) True AMCG00021922
AMCG00021916 mRNA downstream 260139 39283270 ~ 39285802 (-) True AMCG00021916
AMCG00021928 mRNA upstream 9361 39555507 ~ 39556745 (-) True AMCG00021928
TU111960 other downstream 59653 39485833 ~ 39486288 (-) True G89765
TU111863 other downstream 286137 39255879 ~ 39259804 (-) False AMCG00021918
TU111784 other downstream 1148186 38395571 ~ 38397755 (-) True G89611
TU111771 other downstream 1262086 38261387 ~ 38283855 (-) True G89598
TU111619 other downstream 2858299 36678527 ~ 36687642 (-) False AMCG00021897

Expression Profile