Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00010949 |
| length | 872 |
| lncRNA type | read_through |
| GC content | 0.47 |
| exon number | 7 |
| gene id | XLOC_004802 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007123.7 |
| NCBI id | CM002896.2 |
| chromosome length | 49182954 |
| location | 30046320 ~ 30220346 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007010 | cytoskeleton organization | biological_process |
| GO:0030032 | lamellipodium assembly | biological_process |
| GO:0060271 | cilium assembly | biological_process |
| GO:0001725 | stress fiber | cellular_component |
| GO:0015629 | actin cytoskeleton | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0051015 | actin filament binding | molecular_function |
| GO:0003779 | actin binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00010948 | lncRNA | upstream | 2114 | 30162754 ~ 30198532 (+) | False | XLOC_004802 |
| TCONS_00010947 | lncRNA | upstream | 7626 | 30153615 ~ 30193020 (+) | False | XLOC_004802 |
| TCONS_00010745 | lncRNA | upstream | 827232 | 29312565 ~ 29373414 (+) | False | XLOC_004796 |
| TCONS_00009476 | lncRNA | upstream | 827232 | 29312565 ~ 29373414 (+) | True | XLOC_004796 |
| TCONS_00009458 | lncRNA | upstream | 1254496 | 28933524 ~ 28946150 (+) | False | XLOC_004786 |
| TCONS_00009497 | lncRNA | downstream | 149133 | 30360579 ~ 30363549 (+) | False | XLOC_004804 |
| TCONS_00009502 | lncRNA | downstream | 218387 | 30429833 ~ 30432964 (+) | False | XLOC_004806 |
| TCONS_00009503 | lncRNA | downstream | 218414 | 30429860 ~ 30432964 (+) | False | XLOC_004806 |
| TCONS_00009504 | lncRNA | downstream | 219196 | 30430642 ~ 30432628 (+) | False | XLOC_004806 |
| TCONS_00010950 | lncRNA | downstream | 219289 | 30430735 ~ 30432964 (+) | True | XLOC_004806 |
| TCONS_00009485 | mRNA | upstream | 7626 | 30109698 ~ 30193020 (+) | False | XLOC_004802 |
| TCONS_00009483 | mRNA | upstream | 8027 | 30046320 ~ 30192619 (+) | False | XLOC_004802 |
| TCONS_00009484 | mRNA | upstream | 71334 | 30046375 ~ 30129312 (+) | False | XLOC_004802 |
| TCONS_00009478 | mRNA | upstream | 382437 | 29763546 ~ 29818209 (+) | False | XLOC_004798 |
| TCONS_00009474 | mRNA | upstream | 930284 | 29240124 ~ 29270362 (+) | False | XLOC_004795 |
| TCONS_00009493 | mRNA | downstream | 22531 | 30233977 ~ 30307747 (+) | False | XLOC_004803 |
| TCONS_00009494 | mRNA | downstream | 22763 | 30234209 ~ 30308351 (+) | False | XLOC_004803 |
| TCONS_00009495 | mRNA | downstream | 54356 | 30265802 ~ 30306215 (+) | True | XLOC_004803 |
| TCONS_00009496 | mRNA | downstream | 148738 | 30360184 ~ 30367008 (+) | False | XLOC_004804 |
| TCONS_00009498 | mRNA | downstream | 149133 | 30360579 ~ 30366620 (+) | True | XLOC_004804 |
| TCONS_00009482 | other | upstream | 230017 | 29970513 ~ 29970629 (+) | True | XLOC_004801 |
| TCONS_00009481 | other | upstream | 240592 | 29959940 ~ 29960054 (+) | True | XLOC_004800 |
| TCONS_00009480 | other | upstream | 388686 | 29811844 ~ 29811960 (+) | True | XLOC_004799 |
| TCONS_00009479 | other | upstream | 433386 | 29764043 ~ 29767260 (+) | True | XLOC_004798 |
| TCONS_00009477 | other | upstream | 768455 | 29432075 ~ 29432191 (+) | True | XLOC_004797 |
| TCONS_00009507 | other | downstream | 297837 | 30509283 ~ 30509399 (+) | True | XLOC_004810 |
| TCONS_00009521 | other | downstream | 514978 | 30726424 ~ 30756585 (+) | False | XLOC_004818 |
| TCONS_00009526 | other | downstream | 984380 | 31195826 ~ 31195950 (+) | True | XLOC_004821 |
| TCONS_00009527 | other | downstream | 996990 | 31208436 ~ 31208551 (+) | True | XLOC_004822 |
| TCONS_00009554 | other | downstream | 1705497 | 31916943 ~ 31917052 (+) | True | XLOC_004837 |
