Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00009510 |
| length | 956 |
| RNA type | mRNA |
| GC content | 0.34 |
| exon number | 3 |
| gene id | XLOC_004812 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007123.7 |
| NCBI id | CM002896.2 |
| chromosome length | 49182954 |
| location | 30586599 ~ 30618440 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0048747 | muscle fiber development | biological_process |
| GO:0071691 | cardiac muscle thin filament assembly | biological_process |
| GO:0030018 | Z disc | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0051015 | actin filament binding | molecular_function |
| GO:0003779 | actin binding | molecular_function |
| id | description |
|---|---|
| ko04990 | Domain-containing proteins not elsewhere classified |
| id | description |
|---|---|
| ZDB-GENE-060616-224 | Predicted to enable actin filament binding activity. Predicted to be involved in cardiac muscle thin filament assembly. Predicted to be active in Z disc. Orthologous to human NRAP (nebulin related anchoring protein). |
| ensembl_id | ENSDART00000126984 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00010951 | lncRNA | upstream | 111565 | 30470981 ~ 30475152 (+) | True | XLOC_004807 |
| TCONS_00009502 | lncRNA | upstream | 153753 | 30429833 ~ 30432964 (+) | False | XLOC_004806 |
| TCONS_00009511 | lncRNA | downstream | 41730 | 30630019 ~ 30633002 (+) | False | XLOC_004813 |
| TCONS_00010952 | lncRNA | downstream | 41745 | 30630034 ~ 30633002 (+) | False | XLOC_004813 |
| TCONS_00010953 | lncRNA | downstream | 41798 | 30630087 ~ 30633002 (+) | False | XLOC_004813 |
| TCONS_00010954 | lncRNA | downstream | 41801 | 30630090 ~ 30631389 (+) | True | XLOC_004813 |
| TCONS_00010746 | lncRNA | downstream | 43507 | 30631796 ~ 30632376 (+) | True | XLOC_004814 |
| TCONS_00009508 | mRNA | upstream | 19006 | 30563550 ~ 30567711 (+) | True | XLOC_004811 |
| TCONS_00009505 | mRNA | upstream | 57141 | 30498412 ~ 30529576 (+) | True | XLOC_004808 |
| TCONS_00009506 | mRNA | upstream | 70622 | 30501044 ~ 30516095 (+) | True | XLOC_004809 |
| TCONS_00009500 | mRNA | upstream | 166765 | 30367371 ~ 30419952 (+) | False | XLOC_004805 |
| TCONS_00009512 | mRNA | downstream | 64758 | 30653047 ~ 30681927 (+) | False | XLOC_004816 |
| TCONS_00009513 | mRNA | downstream | 65653 | 30653942 ~ 30681342 (+) | False | XLOC_004816 |
| TCONS_00009515 | mRNA | downstream | 117480 | 30705769 ~ 30711995 (+) | False | XLOC_004817 |
| TCONS_00009516 | mRNA | downstream | 117566 | 30705855 ~ 30712111 (+) | False | XLOC_004817 |
| TCONS_00009517 | mRNA | downstream | 117869 | 30706158 ~ 30709125 (+) | True | XLOC_004817 |
| TCONS_00009507 | other | upstream | 77318 | 30509283 ~ 30509399 (+) | True | XLOC_004810 |
| TCONS_00009491 | other | upstream | 375271 | 30207213 ~ 30211446 (+) | False | XLOC_004802 |
| TCONS_00009487 | other | upstream | 385948 | 30168330 ~ 30200769 (+) | False | XLOC_004802 |
| TCONS_00009482 | other | upstream | 616088 | 29970513 ~ 29970629 (+) | True | XLOC_004801 |
| TCONS_00009481 | other | upstream | 626663 | 29959940 ~ 29960054 (+) | True | XLOC_004800 |
| TCONS_00009521 | other | downstream | 138135 | 30726424 ~ 30756585 (+) | False | XLOC_004818 |
| TCONS_00009526 | other | downstream | 607537 | 31195826 ~ 31195950 (+) | True | XLOC_004821 |
| TCONS_00009527 | other | downstream | 620147 | 31208436 ~ 31208551 (+) | True | XLOC_004822 |
| TCONS_00009554 | other | downstream | 1328654 | 31916943 ~ 31917052 (+) | True | XLOC_004837 |
| TCONS_00009570 | other | downstream | 2363493 | 32951782 ~ 32951896 (+) | True | XLOC_004848 |
