RNA id: TU100372



Basic Information


Item Value
RNA id TU100372
length 594
RNA type TUCP
GC content 0.52
exon number 5
gene id LOC122351456
representative False

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 4856650 ~ 4973955 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GATCTTTGTGGATCTCGAACGTCTTTGCCTCGAAACGGCAACAGTTCGGGAAACACTCCGAACCGCGGCAACACGACGGCCCACGTGTGCTGGCACCGCAACACCAGTGTTTCCATGCTGGACTTCAACACGGCCATCGAGAACCAGCTCTCAGGAAATCTGCTCCGGAAGTTTAAAAACAGCAACGGCTGGCAGAAACTCTGGGTGGTCTTCACCAACTTCACCCTGTTCTTCTACAAAACACACGAgGACGAGTATCCTCTGGCCAGTCTGCCTCTGTTGGGTTACTCAGTGACTCATGCAGGAGAATCTGAAAACATCCACAAAGAGCACGTCTTCAAACTGCACTTCAAATCTCATATCTACTACTTCAGAACGGAGAGTGAATACTTTTTCGACAGATGGATGGCGGTGATCAGAAGTGCCACGGTCTCTGCCAGCAGAACCCGTTATCTGAACCGGACAGAACCGGACTGAACCCCGGAGAACCCGGCATCTGAACCGGACAGACAAAAACACGAACCAACAGACCCACGCAGGCATATAGGGAGCAACcatctccgtgtgtgtgtgtgtgtgtgtttgtgtgctttt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU100187 lncRNA downstream 220308 4636010 ~ 4636342 (-) True G67747
TU100185 lncRNA downstream 237782 4615858 ~ 4618868 (-) False pde11a
TU100165 lncRNA downstream 300900 4552424 ~ 4555750 (-) True G67730
TU100168 lncRNA downstream 304775 4551237 ~ 4551875 (-) True G67733
TU100138 lncRNA downstream 429004 4427288 ~ 4427646 (-) True G67712
TU100466 lncRNA upstream 59629 5005294 ~ 5006781 (-) True G67904
TU100474 lncRNA upstream 81379 5027044 ~ 5027597 (-) True G67911
TU100476 lncRNA upstream 104764 5050429 ~ 5051292 (-) True G67913
TU100488 lncRNA upstream 143517 5089182 ~ 5089393 (-) True G67923
TU100495 lncRNA upstream 154241 5099906 ~ 5100777 (-) True G67928
XM_043248581.1 mRNA downstream 33685 4792424 ~ 4822965 (-) False LOC122351499
XM_043248583.1 mRNA downstream 33688 4792424 ~ 4822962 (-) True LOC122351499
XM_043248582.1 mRNA downstream 33690 4792424 ~ 4822960 (-) False LOC122351499
XM_043248535.1 mRNA downstream 64911 4781700 ~ 4791739 (-) True casp10
XM_043248641.1 mRNA downstream 75973 4774995 ~ 4780677 (-) True prkra
XM_043248828.1 mRNA upstream 31994 4977659 ~ 4985596 (-) True LOC122351620
XM_043248237.1 mRNA upstream 62520 5008185 ~ 5009514 (-) True tmem37
XM_043248550.1 mRNA upstream 64913 5010578 ~ 5014791 (-) False dbi
XM_043248546.1 mRNA upstream 71403 5017068 ~ 5022355 (-) True steap3
XM_043248554.1 mRNA upstream 176542 5122207 ~ 5128098 (-) True insig2
XR_006251761.1 other downstream 33688 4794951 ~ 4822962 (-) False LOC122351499
XR_006251762.1 other downstream 33688 4794953 ~ 4822962 (-) False LOC122351499
TU100077 other downstream 734811 4120548 ~ 4121839 (-) False G67668
TU99606 other downstream 1662158 3189847 ~ 3194492 (-) True G67358
TU99607 other downstream 1663710 3189847 ~ 3192940 (-) False G67358
TU100414 other upstream 14052 4959717 ~ 4983747 (-) True G67863
TU100469 other upstream 64848 5010513 ~ 5014735 (-) False dbi
TU100470 other upstream 64848 5010513 ~ 5014813 (-) True dbi
TU100475 other upstream 83261 5028926 ~ 5029475 (-) True G67912
TU100497 other upstream 160229 5105894 ~ 5108387 (-) True G67930

Expression Profile