RNA id: TU100850



Basic Information


Item Value
RNA id TU100850
length 302
RNA type TUCP
GC content 0.60
exon number 2
gene id LOC122351979
representative False

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 6099071 ~ 6099912 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TGGTGTGTTTCTCCGTCTCAGTGGCAGTAGCGGGGGCAGCGGCGGGCGAGAGAACAGCAGTAATAGTATGGGAATCCCTCTGGCTGTGCCAACACCCTCCCCTCCCAGTATGGCACCAGTTCCTCCAGGTCCAGGTTTGGGCCCGATCCCGATGTCTCAGTTTGGAACAATCTCCCGACAGATCTCCAGACACAATTCCTCTACCACTTCTTCCTCTGCCTCTATGGTGTCAGCCACCGGCACCTACCGGCGCGCCCCTGCCAGCTCCTCCCAGTTCTCCGTGCCTCAGCCCCACCTGAACG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU100773 lncRNA downstream 51751 6045115 ~ 6047596 (-) True G68120
TU100695 lncRNA downstream 293020 5805940 ~ 5806327 (-) True G68082
TU100657 lncRNA downstream 363564 5735337 ~ 5735783 (-) True G68055
TU100655 lncRNA downstream 364175 5734924 ~ 5735172 (-) True G68053
TU100650 lncRNA downstream 383710 5715341 ~ 5715637 (-) True G68048
XR_006251731.1 lncRNA upstream 17968 6117851 ~ 6142682 (-) True LOC122351301
TU100892 lncRNA upstream 141439 6241322 ~ 6241602 (-) True G68189
TU100973 lncRNA upstream 580212 6680095 ~ 6683011 (-) True G68265
TU100974 lncRNA upstream 597803 6697686 ~ 6697893 (-) True G68266
TU100979 lncRNA upstream 616113 6715996 ~ 6718143 (-) True G68270
XM_043248544.1 mRNA downstream 543 6088469 ~ 6098804 (-) True LOC122351467
XM_043248543.1 mRNA downstream 12328 6069745 ~ 6087019 (-) True LOC122351466
XM_043248234.1 mRNA downstream 120469 5975136 ~ 5978878 (-) True LOC122351270
XM_043248541.1 mRNA downstream 168211 5912855 ~ 5931136 (-) True LOC122351463
XM_043249311.1 mRNA downstream 199704 5888893 ~ 5899643 (-) True LOC122351906
XM_043249183.1 mRNA upstream 219207 6319090 ~ 6477546 (-) False myo16
XM_043249184.1 mRNA upstream 219207 6319090 ~ 6464268 (-) False myo16
XM_043249182.1 mRNA upstream 219207 6319090 ~ 6452147 (-) True myo16
XM_043249186.1 mRNA upstream 222825 6322708 ~ 6452148 (-) False myo16
XM_043248919.1 mRNA upstream 387355 6487238 ~ 6492356 (-) True tnfsf13b
TU100782 other downstream 55422 6043275 ~ 6043925 (-) True G68124
TU100767 other downstream 176527 5919757 ~ 5922820 (-) False LOC122351463
XR_006251815.1 other downstream 729758 5349955 ~ 5369589 (-) False LOC122351925
TU100497 other downstream 990960 5105894 ~ 5108387 (-) True G67930
TU100475 other downstream 1069872 5028926 ~ 5029475 (-) True G67912
TU100887 other upstream 147017 6246900 ~ 6261069 (-) True G68188
TU101110 other upstream 971102 7070985 ~ 7148620 (-) False LOC122351350
TU101496 other upstream 1914566 8014449 ~ 8018105 (-) False LOC122351623
XR_006251804.1 other upstream 1979253 8079136 ~ 8094847 (-) False als2a
unassigned_transcript_1465 other upstream 2241060 8340943 ~ 8341015 (-) True trnak-uuu_106

Expression Profile