RNA id: TU101764



Basic Information


Item Value
RNA id TU101764
length 362
RNA type TUCP
GC content 0.49
exon number 3
gene id cryba2b
representative False

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 8863387 ~ 8866305 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CTGTTACCAGGCCTGGAGTGGCAACAGCAGTTACAGAACAGAGCACATGCTCTCTTTCAGACCCATTAAATGTGCTAACCACAGTGACAGTAAGATTACCCTCTATGAGTGTGAAGACTTCATGGGACGCAAATTTGAGATGTGTGAGGATTATCCCTCCCTTCAAGCCATGGGTTGGTGCAGCAAGGAAGTTCCCTCAATCAAAGTCAACTCTGGAGCCTGGGTAGGCTATCAGTTTCCCGGTTACCGTGGATATCAGTACATCTTTGAGAGGGACAGACGCCAAGGAGAGTACAGATGCTACAACGAGTACGGCACCCAGGCACACACCAATCAGATCCAGTCTATGCGCAGAATTCAGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006251839.1 lncRNA upstream 4270 8859473 ~ 8860379 (+) True LOC122352063
TU101758 lncRNA upstream 37603 8826212 ~ 8827046 (+) True G68808
XR_006251751.1 lncRNA upstream 249665 8600724 ~ 8614984 (+) True LOC122351403
TU101678 lncRNA upstream 358506 8502756 ~ 8506143 (+) False igf2bp2a
TU101562 lncRNA upstream 641832 8222587 ~ 8222817 (+) True G68678
TU101765 lncRNA downstream 1242 8867139 ~ 8868277 (+) False fev
TU101845 lncRNA downstream 181563 9047460 ~ 9078537 (+) True G68879
TU101846 lncRNA downstream 197223 9063120 ~ 9064676 (+) True G68880
TU101861 lncRNA downstream 292379 9158276 ~ 9160821 (+) True LOC122351827
TU101871 lncRNA downstream 310427 9176324 ~ 9178926 (+) True G68895
XM_043248054.1 mRNA upstream 32747 8827690 ~ 8831902 (+) True umps
XM_043248053.1 mRNA upstream 40258 8801297 ~ 8824391 (+) True itgav
XM_043249543.1 mRNA upstream 66714 8793317 ~ 8797935 (+) True zc3h15
XM_043249719.1 mRNA upstream 162354 8651167 ~ 8702295 (+) True znf804a
XM_043248052.1 mRNA upstream 294652 8566454 ~ 8569997 (+) True nup35
XM_043248266.1 mRNA downstream 1200 8867097 ~ 8871633 (+) True fev
XM_043249163.1 mRNA downstream 100964 8966861 ~ 8976999 (+) True chpfa
XM_043249573.1 mRNA downstream 276695 9142592 ~ 9150093 (+) True si:ch1073-416j23.1
XM_043249574.1 mRNA downstream 276695 9142592 ~ 9150093 (+) False si:ch1073-416j23.1
XM_043249171.1 mRNA downstream 290148 9156045 ~ 9159759 (+) False LOC122351827
TU101615 other upstream 431166 8431145 ~ 8433483 (+) False sumo3b
TU101608 other upstream 521970 8341298 ~ 8342679 (+) False si:ch211-167j6.3
TU100736 other upstream 2899769 5962967 ~ 5964880 (+) False LOC122351907
TU100723 other upstream 2978896 5883927 ~ 5885753 (+) True G68097
unassigned_transcript_1464 other upstream 3407120 5457458 ~ 5457529 (+) True trnam-cau_112
XR_006251841.1 other downstream 276695 9142592 ~ 9149666 (+) False si:ch1073-416j23.1
XR_006251842.1 other downstream 276695 9142592 ~ 9149661 (+) False si:ch1073-416j23.1
XR_006251853.1 other downstream 577228 9443125 ~ 9556647 (+) False thsd7ba
XR_006251850.1 other downstream 1462834 10328731 ~ 10395230 (+) False il1rapl1a
TU102754 other downstream 2617540 11483437 ~ 11489996 (+) False LOC122352020

Expression Profile