RNA id: TU101872



Basic Information


Item Value
RNA id TU101872
length 295
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G68896
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 9180751 ~ 9184568 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TTGGCCTGCTTCTCTGCCTTCTTCGCCGCTTTCTCTGCTTCCTTCTGCTGTTTCTTTAGGGCTTTCTTTGATTGGGCTTGCTGCTCCTCCTCAGCGGCTCTAAAACAGGAAGACACCTTGCACATTTTCTTTAGTCATAGTTCGGCTCTGAAGGGATGCAGTGAAACAAAAGCACTAGATATTGAGGATTAAAGTCTTGTTAATGTACAGTGACAGCCACTGGGAACGATGGACATGTGGAGAAGCGTGGAAGTGTTTTGCTGTTGCACATTCACGGCTTCCTCGCGAGTCCGTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU101871 lncRNA upstream 1825 9176324 ~ 9178926 (+) True G68895
TU101861 lncRNA upstream 19930 9158276 ~ 9160821 (+) True LOC122351827
TU101845 lncRNA upstream 102214 9047460 ~ 9078537 (+) True G68879
TU101846 lncRNA upstream 116075 9063120 ~ 9064676 (+) True G68880
TU101765 lncRNA upstream 312474 8867139 ~ 8868277 (+) False fev
TU101878 lncRNA downstream 56370 9240938 ~ 9241387 (+) True G68900
TU101881 lncRNA downstream 70764 9255332 ~ 9412735 (+) True G68901
TU101892 lncRNA downstream 390853 9575421 ~ 9575654 (+) True G68908
TU102047 lncRNA downstream 706083 9890651 ~ 9891580 (+) True G69003
TU102091 lncRNA downstream 870928 10055496 ~ 10056501 (+) True G69028
XM_043249170.1 mRNA upstream 20766 9156051 ~ 9159985 (+) False LOC122351827
XM_043249171.1 mRNA upstream 20992 9156045 ~ 9159759 (+) False LOC122351827
XM_043249573.1 mRNA upstream 30658 9142592 ~ 9150093 (+) True si:ch1073-416j23.1
XM_043249574.1 mRNA upstream 30658 9142592 ~ 9150093 (+) False si:ch1073-416j23.1
XM_043249163.1 mRNA upstream 203752 8966861 ~ 8976999 (+) True chpfa
XM_043249639.1 mRNA downstream 258557 9443125 ~ 9566997 (+) True thsd7ba
XM_043249642.1 mRNA downstream 258557 9443125 ~ 9566997 (+) False thsd7ba
XM_043249641.1 mRNA downstream 258557 9443125 ~ 9566997 (+) False thsd7ba
XM_043249644.1 mRNA downstream 258557 9443125 ~ 9566997 (+) False thsd7ba
XM_043249643.1 mRNA downstream 258557 9443125 ~ 9564234 (+) False thsd7ba
XR_006251841.1 other upstream 31085 9142592 ~ 9149666 (+) False si:ch1073-416j23.1
XR_006251842.1 other upstream 31090 9142592 ~ 9149661 (+) False si:ch1073-416j23.1
TU101764 other upstream 314854 8864649 ~ 8865897 (+) False cryba2b
TU101615 other upstream 747268 8431145 ~ 8433483 (+) False sumo3b
TU101608 other upstream 838072 8341298 ~ 8342679 (+) False si:ch211-167j6.3
XR_006251853.1 other downstream 258557 9443125 ~ 9556647 (+) False thsd7ba
XR_006251850.1 other downstream 1144163 10328731 ~ 10395230 (+) False il1rapl1a
TU102754 other downstream 2298869 11483437 ~ 11489996 (+) False LOC122352020
TU102836 other downstream 2861931 12046499 ~ 12155804 (+) True G69527
TU103038 other downstream 3442967 12627535 ~ 12629535 (+) True G69670

Expression Profile