RNA id: TU102094



Basic Information


Item Value
RNA id TU102094
length 554
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G69031
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 10061058 ~ 10061611 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TTTACTAAGTGCTTTATTGCTTTTTGGCTCAAAAAAGTGTTTGATTGGAGTGTTTTGagttgcaaaaaataaaacaaatctatgTTTCTTATAACCTTGAACCTTATCAGTGTGCAAAACTACCCAGTACTGtcttataaatgttacaaagtTATTTCAGTAGTCCTTTCAtctttcattcatccatccatccattcatctaaaTACATCAACACCCTTTTATTCGGGATTATTTGATCCACTCCATAAAAATCTACATACACTTACAACAACAGTTTCAATGAAACCATATTAAATGCTCTGATAcagattctctctctgtcttacACGTTCCCATTACCCTCCCATTCGTGCTGTTCATGCCTTTCCTAtcccaaataaatgaaatatccCATATAGTACCAGCACTCAAGaatactcacacacatacacacacaagcatgcacACCTCTAACATCCATATCTCTCATCCTAAGGCTAGTTCACACTCCAAGCTTCTCATCTCTTGGACAGCCCTGTAACCCAACCTACACGGCCAGATCACCTGGTCTGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU102091 lncRNA upstream 4557 10055496 ~ 10056501 (+) True G69028
TU102047 lncRNA upstream 169478 9890651 ~ 9891580 (+) True G69003
TU101892 lncRNA upstream 485404 9575421 ~ 9575654 (+) True G68908
TU101881 lncRNA upstream 648323 9255332 ~ 9412735 (+) True G68901
TU101878 lncRNA upstream 819671 9240938 ~ 9241387 (+) True G68900
TU102095 lncRNA downstream 74 10061685 ~ 10061887 (+) True G69032
TU102096 lncRNA downstream 597 10062208 ~ 10062436 (+) True G69033
TU102097 lncRNA downstream 9047 10070658 ~ 10070891 (+) True G69034
TU102101 lncRNA downstream 30739 10092350 ~ 10099485 (+) False piga
TU102102 lncRNA downstream 30739 10092350 ~ 10101717 (+) True piga
XM_043248467.1 mRNA upstream 9524 10042165 ~ 10051534 (+) True si:dkey-229b18.3
XM_043248133.1 mRNA upstream 22696 10030801 ~ 10038362 (+) False chaf1b
XM_043248132.1 mRNA upstream 22696 10030805 ~ 10038362 (+) True chaf1b
XM_043248131.1 mRNA upstream 30506 10022693 ~ 10030552 (+) True LOC122351209
XM_043248129.1 mRNA upstream 38828 10007954 ~ 10022230 (+) False LOC122351208
XM_043248209.1 mRNA downstream 20665 10082276 ~ 10086961 (+) True gja8a
XM_043249107.1 mRNA downstream 36179 10097790 ~ 10113356 (+) False piga
XM_043249108.1 mRNA downstream 47334 10108945 ~ 10113356 (+) False piga
XM_043249106.1 mRNA downstream 47335 10108946 ~ 10113355 (+) False piga
XM_043249110.1 mRNA downstream 52383 10113994 ~ 10117548 (+) True asb11
XR_006251853.1 other upstream 504411 9443125 ~ 9556647 (+) False thsd7ba
XR_006251841.1 other upstream 911392 9142592 ~ 9149666 (+) False si:ch1073-416j23.1
XR_006251842.1 other upstream 911397 9142592 ~ 9149661 (+) False si:ch1073-416j23.1
TU101764 other upstream 1195161 8864649 ~ 8865897 (+) False cryba2b
TU101615 other upstream 1627575 8431145 ~ 8433483 (+) False sumo3b
XR_006251850.1 other downstream 267120 10328731 ~ 10395230 (+) False il1rapl1a
TU102754 other downstream 1421826 11483437 ~ 11489996 (+) False LOC122352020
TU102836 other downstream 1984888 12046499 ~ 12155804 (+) True G69527
TU103038 other downstream 2565924 12627535 ~ 12629535 (+) True G69670
XR_006251865.1 other downstream 2669225 12730836 ~ 12730962 (+) True LOC122352187

Expression Profile