RNA id: TU102946



Basic Information


Item Value
RNA id TU102946
length 329
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G69607
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 12279793 ~ 12280197 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GAGCCCGATAAAGAGATCGGTGGGATCAAAACAAATATCAGCTGCTGCGGTAGAGCGCCTTCATCAAACGTCTTGGGAGACCACCAACACTTCCCTCTTGGCTGGAATCCCCACTTATccaatgtttgtgtgtgtccagTGGACCGGTTGTTATTCTACATAACAAACTTGAGAGCAAAAAAGGCACCTCGAGCGAACTGGAGCAACTTTTAGCAAATCTGTTTCTTTGAGGTCTCGGCAAGCTCAGCCAGCTGTACTGACAAGTTCTTTTGCCTGTAAAAGTGACTGTTGACCTGGCCTGTGTCTTCTCTCAATGCATCCTCCTCCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006251707.1 lncRNA downstream 9646 12268112 ~ 12270147 (-) True LOC122351183
TU102924 lncRNA downstream 123354 12085714 ~ 12156439 (-) False G69596
TU102926 lncRNA downstream 123354 12085714 ~ 12156439 (-) True G69596
XR_006251827.1 lncRNA downstream 325559 11790781 ~ 11954234 (-) True LOC122351998
TU102798 lncRNA downstream 786673 11396676 ~ 11493120 (-) False LOC122351858
XR_006251738.1 lncRNA upstream 23517 12303714 ~ 12321820 (-) True LOC122351337
TU102984 lncRNA upstream 112116 12392313 ~ 12393474 (-) True G69639
TU102985 lncRNA upstream 113900 12394097 ~ 12394329 (-) True G69640
TU102986 lncRNA upstream 114574 12394771 ~ 12395000 (-) True G69641
TU102987 lncRNA upstream 115869 12396066 ~ 12396514 (-) True G69642
XM_043248071.1 mRNA downstream 35005 12196754 ~ 12244788 (-) False zeb2a
XM_043248073.1 mRNA downstream 35162 12196754 ~ 12244631 (-) False zeb2a
XM_043248072.1 mRNA downstream 36169 12196754 ~ 12243624 (-) True zeb2a
XM_043248076.1 mRNA downstream 36460 12196754 ~ 12243333 (-) False zeb2a
XM_043248074.1 mRNA downstream 36460 12196754 ~ 12243333 (-) False zeb2a
XM_043248561.1 mRNA upstream 165355 12445552 ~ 12452338 (-) True itm2bb
XM_043249278.1 mRNA upstream 238087 12518284 ~ 12554050 (-) True lrch1
XM_043249281.1 mRNA upstream 238087 12518284 ~ 12553992 (-) False lrch1
XM_043249280.1 mRNA upstream 238087 12518284 ~ 12553989 (-) False lrch1
XM_043249279.1 mRNA upstream 238087 12518284 ~ 12553980 (-) False lrch1
XR_006251743.1 other downstream 90137 12166991 ~ 12189656 (-) True gtdc1
TU102802 other downstream 780421 11497010 ~ 11499372 (-) False LOC122351308
XR_006251823.1 other downstream 1593166 10680158 ~ 10686627 (-) False mrasa
XR_006251803.1 other downstream 1760336 10515272 ~ 10519457 (-) False fdx1
XR_006251820.1 other downstream 1837921 10433507 ~ 10441872 (-) True trim13
TU102995 other upstream 142232 12422429 ~ 12423446 (-) True G69650
TU103144 other upstream 428434 12708631 ~ 12711824 (-) False LOC122351186
XR_006251867.1 other upstream 457847 12738044 ~ 12738171 (-) True LOC122352189
TU103179 other upstream 704927 12985124 ~ 12985978 (-) True G69757
TU103524 other upstream 1192943 13473140 ~ 13495645 (-) False gypc

Expression Profile