RNA id: TU103010


Basic Information

Item Value
RNA id TU103010
length 7976
lncRNA type inter_gene
GC content 0.37
exon number 2
gene id G69659
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 12518289 ~ 12526873 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGGGGAAAGTATTTACTGGTAGAAGTTGGTACAAATAAACCTTATTTACAGAGAGGTTAAGGCAAAAGGTGGAATGACATGCATGCATTTCCCAAAAAACATTACTGTACATGCATTTAAAGTTCACAGAATTACAAAGGGGAAGAATCCCAAACACTGAAAAGACATGGAAAAATAATtcctatttataaaattaaagtaCAAAACTGTTTAGTACAAGCCGTTTCTCCTTATACAAAGTAGACAAAATAGCCACATAACATTCAGCAGTTAAAGATTTGTATCccattttaaagtgatttctcAAACACATCAGTAATCCGACCATCTGATATTTTCTccaaatactgtaatataaatacCACGCTTAATACTATTTGCCAGTTGCCAAAAAGACAGTCCCAAATACATAAAGTGCAAAACACTGtcatttcaaaatcaaatctgCATTTAAACCTCTATCTAGTGTGTATGAAGCAGACTTAGTTTCGCTGCTGTTTCTGTGAAGTGGTGGGGAATGTTGAGGGTACAGTAACGATGCACAACCTGTTCACTGTAGTGGAGATTTTCATACTGTACTTGAATATGAACCATAAACCTCAAATCGGTATTTTCTATTCTTTGAGGACGACATTTCTTGAAAGGTAAAGCGGTGAATTTATAGGATGTGATTGTGGTCTAAACtatgcatgaatattttttttttaatgcaaaagcaaagatttgtaaaataaaaataccatgtGAAGCTACTACCAAAAACCAAAATCTTAAGTGCTATCCCGTTCAAATGTCTCTAAAATTTCTAATCCGCatcttcattttctttccatttgTTTCATTCAAATCACTAAAGGTTTAAAATCTAGGAAGCTGTGTGAGTATTATTAGGAAAGCATTTTAACCCATGATGCACCAATTCAaagcttctggccaaaatattgTCCTATAGTATAATAATGCGCATTAAGTTTAAAGAGCAGATAATATACGTTTTTGTTGACTATTACAGTACAGAGATAATCCTTAGTAAATGCATTGTATTTGTATTGAATGCATGAATTACTGTCATGAATAAATAGTTACAGCCCACAGTCTCTCAGAAATCCCACATGGAAGTGTTATAACTGCTTTCATATAAGAACCTAAAagagtttttttcccctgtcagttcacattaataaaataaattgtgctttagttttaagtaaaataaacacCGAttcaaacatattaaaataaacacatcaaatataaatgttctgTACATTTTACACGTTCACACACCAACATCACGTAACAAATCCTTCTACAAATActacaaaacctttattttaaaaatacattttaaaaaactataaaatgattatgtttgTAAATCAGTTTtgatatatgaaaataattttggCAACTGTCAAATAATCTCCAGTGAGATATCAGCTTCAGGTGTTTTGGTCTGTTTCATGGCTGAATCTGCGAGGAGCTGAAGCTTTGGACACTAGACAAATacgcactaaaaaaaaaaaaaacacacaaacttgcatataaaaaaaaaaaaagtgccaacATGTGCTCTCGTCCTCTCACGCTCGCAAAGAAATACTCCTCAAGGTATAACTCACGcataaacaactgaaaacaaatgCCAGGTAAGTTGTTTTCTACCGTCCACACactcaaacatatttttttttttagtgaaatCATTCCTGACCGACAGGTAAGCAGAGCAGAGACCGTAAGAAACTATAGTGAGGCCACACCTCCCCTGAGACAAAACATCACCGTCTcccaaaaaccaactcaaaagtGGTTACAAAACCAGACTCTGGGAGGATGAGTGTTTTAAATCTAGATCGCTAAAGGTTTGCCCAAAACAAATATCATATGGGTAAATGCGTATATAAAAACCATCAGAAATTGTGCACAATTCTGTATACCTCTCAACTAAccgtttaataaataaatgcattttaaataaaacaatttcttaTCTTAAGCTGCTTTTGAGCTAATTTTGCTTATACGACCTGTGGCCTGGGCGACAGTGATCAGATAACAGTActaaataagaaagaaaagaaagtgagGGAAACATGAGCATATACCTGCAAGCTGAGGATCAACTGTTCTAATAGCAATAAATGGACACAGTCCAGGGAAATTCTTAAAGATTGTCTTCCGGtattagcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgactCATGTGATGAGTGTCTCACTGGCCGAAGTCTCATCCAGCAAAGCTTGGACAGTGATGCCAACTTTGATCAGGCCCTTCTCCTCAAGAATGTGATGTGGCAGACATAACTTATcctagagagagagattcaCAGAGAAGACAAACAAAGTGTCGTGTCAGAGAAGAAAGACACACAGTCAtggaaaacagaatttattatGCACAGTCCATTCAAATGTAACGCTCTTGAATCCAGTTAGTGAAACTAATAGAGACTCACCTTGTTTAGCAGTGATGGCAAATACGATATCAGTcatgcaaacaataaaaaaaaaaaaatgctgaccccaaacatttaaacggTGGTTTAAAAAGGCAAAGATGAGAAAAACAACCCAAACtgtacatttattctttttcatttacaggTTCATAAAAACCACAAAGCCTTACAAAGTCCACTAGAAGCAGCAGCACTGAACGCTATTCAAGAAGCGGCTGAACCGTCAGAGGAACCCACGCAATCTAATTTAAGCAATACAAACACTTTTTGCAtcttgcagctttttttttttttttttttttttacaaaggagGAAATATGCCGAACAAAAAGTCCCGAACAGTCAATATTGCCTTTATTTTTGTCAAACTGGATGATGAAAGCAGTGCCAATTATAACTGCTGTGATCCCGCCGATAAGGTTCAAAGTATTCTGTAGTTTGAGGAAGTGATGTCAAGAGGCCTCAGTGACATGCTCATTTACTAACGGCTCTCTTTAAAGATTTCTTTTATCTCTGATGAGATAAAGAAGGTCATTCTATTACGTGAGATAATGATCGGAACCTAAAATAGAATCAGAGCATCCGATTAGAAGACCCTCCGTTCTAGAGACACCTTGCATACAGACCTTCAACGAAGTAAATTACATACAGCCACTACACTGATTACTCAAttattaaaactgcattaatatgatatttcatcattttaaaaaaagccacCTCAACCTCTATTACAGATCACTGATAGAATACACGAATTAAAGCGTATTATCCGATGCTGTTGTTCCTTGGATTAGTCACATTGCTGTGGAATGTTgcttattaaatttattaaaaaatagatttggTTCGCTCTGTCATTCTGTTTTACTAATGATCGGGAAATGAAACCAATGATTCATTAGTCCCGTTTCATCCCATAGATGGCGTTTTGGAAAAAATAGCAATCTAATCATTTGCAACGACTGTGCAGGATGTTTAATAATTCCCGATCTAAACAATAACACATCATGCTCTTAAAAACACTCATAACCAAACTAACTGCTTTTTACATCCAACAGACAAATTAGCCCTTATGctaatgattaaatgttttaatcataGATATAACCTCACCGTACAAGACTTCTGTGCAAGCGAAGCTTATCATTTTGCTTTAATGGCATCTGGGCCTTCACTTACTCGAGCTTCCTGATTTATTATCTGCAAATTATTTTGTGTGAAGCAGACCAAATGTGCGCTTGATTCCTGTAGATATATTGCTGATCACTGGCATGACTGGCAcatccgttttttttttgtcatgcagATGCTAATAagtatatattgtttatatgtgCAATATCCGACAAAGTTCAGCATTACGACTGCTGAAACGGAACTTTGTGAAACAACTTTTGTACAGAAGTGGAAGTGAGTGAGAATGTGGCCATTCGTCATTCCTCATTAAAGTGCTCCGTGCACCTCCTGcgtaaatgtttgtaaaaaggTTTCCTTAGCATTTTGCAAGGACTGATAAATATGGTATTCGAATCCCCGACTAATAAATAACACTTACTCgagcatgaaaatatttaaatctctTCCTGGAGCgcgttatttttttacaaaaatgttgcatgtttGGTTTTACGTATGGTTTCCATCACGGCCAAGGTAAGATGTAAGGTTTGATCAGACATGAAACTCTCTGGGCTGTGCtcattcacccaaaaatgaaaattctgcagTTTGAGTTGGtctccattgacttccacaatATGGAAATCAGCGGAGACCACAATTGCTTGGTTACCCGCATTCtttaaactattttcttttatgttccaaagAAATAAACCCGTACGGTTTTGTAACAAACCACTTGAGGGTGAGTAcgtgatgacagaattttcatttttgggtgtactatACCTTTAAGTGAGGCCAACCGTTCAATGTGCTTTCAAAGACCAGTAAATGATATAATGTGTTACTTTTGAGTTATTAGTTCatgtatgttatttaaattcGCTCCAGCTGTAGGCCACAAACAGCATCACCAGACAGAAAACGTGCAGTAGACTTGAGCCAATCAGATCCCATATTTGCCAGGAAGGGGGTGGAGTCTGAGTGGACTCGGGGATAAGCTTCttgacctctgtctctttctccctGCCACTTTCCACCTTTCCTTCCTTCTGCCTTGTTCCTGTGCTCTCCGCCATGAGCAAGGCCGCGACCACGGCCCAGAGCGGACGCAGGTTAAACTGCAGAACGTCATAAGCCGAGCAGAGAGAGGACTGAGAGAGATTAAAAACATGGAGGGGATGACAAAGAGAACcaggaagaggagaagagaacAGAGTAATAATGAAGAATGGATGGACAGAGAAACAAAGggagaagaaaaggaaagaagaaGGGAAATGAGAAAAGGAGAGATCATCCGTCCGGCACCAGAGAAAGATAAGGAATGTGATTAGACAGTGATAAAGGTCAAAGGTAAAATGCTTTGAGCTCAACAAATAACAAGAGTTCTGGATTATTGTCAAGAAATGATTACATTTGTGTAATAAATATGAGTTCCCATGATCACCGATAACGTAGTTAACAAGATACTAAAGTCACATTTAGCGTATACTGGAGCCATTTAAATTTGAggaattttactttttttcatcaaaatatcctCGTTCATCACCGATACATGAGTTGTACAGTATTCTGCTCAACCagtaaaactttattaaaaaatatgtctgACGTATTTAAGAAAAggaaattataatatttgtttctttttctgattGTCTTATATAGCGTGGTGCAAATACCTTTgtctacgtttttttttttttataatatgctgatttggtgctttagaataattaatttttcatttctaattaATATTAGCTGTGTTGCTCATATTTTTtaggaaaccattttttccaggattctttgatgattagaaagttcaaaagaacagcaacattataaatgtcttcactgtcccTTTTGATTAACTGAATTCATACCTGctgaatacaattttttaataatttactgtccataaacatttaaaatggtaGTATAATACTACAAGTAGTGTAAAatagtgtgtatttatgtaatatgtatacataatatgtgtgtaatatgcatatataatatttgactGTGTgcaaattacaaatgtatatattataaacttaGTGTGATCATTACAAAATTGGCCATTGAACTAATATTGAATAAACATGGTCATTaagtttttttatgaattgcttttttcattaaatctaTCTAAATCTATCTTTTTTAAACCatataaaatgaagtgaaaacaCAAACCCAAAACAAGATTTTCGAGCACAAATGTCATCAATTCCCGAGAATGACCCTCTTACTGCCTTCTGAAAGAGCTTTCTGTCGAGGTTGAACACCGTCGGTCACAGTCTCTCGTTCAGGAGGCAGCTGTGGCTGATGTTAGGTATGCTGGGGCGGATGCTGTTAGCAGGTGACATGGTGACATGGTGGTTAGCGGAGCATGTGCAGTAGTGGGCGGACGTACATTATGCCAGGCGCAAGTCAAGCTACagccttttaaaaatgatacgAAGCAAGAGAGCTGCAAAAGCCAGTACAGAGCAGAGCAGGTCAAGCTACACTGTTGCATATCCCACCAACTAAGCTAAATTGggcaataatatatattaaccaGGAGTTAGCGAAGCAAACAAGGCCTTTTACGTTAGCCCTAAACACGCTAACAGAATAAACTAGCTTGATAAACGTCAGCTAGCAGGATAGCAAACACGAGACAAATGTTGACAAAGCTAGCTGCCATGCAGACTCGTAGTAGCTAACGCTACTACAGACACAAGCTATGACGACTAAAAGCTTCCTGTAAGACACGCTAATCAGAACGGCCTGTTATGAATGGCTTGGACCAAGCTCAACCCGTAAAGCTGAACACTGGGCTCCTTCTAGAAAGGCTACCGATATGGTATTGTAACCACTTTTAGTAGGTAGGATGGAATAACAATAGAAACGTCTGCACAGTTTGAGCAAAAAAAGCTGACCAACAGCCCTCACGCAAAAGACATgcatcaaaacaacaacaaacatttcGTCCATGTTTCAAGACAACATGGACATTGTGTTCATTGTGGCTAGTTAGGACATACAAAGATTTTCATGGATGTGACAGCTGTAATTGCTTCTGGCTTTATCTGGATAAGACAATGTATTACACAAATTGCCTCACTGAATTGATGaaataatggtttaataaagaGAAATTAGTTTCACTCATATGTTATGGTCCGCTGCCTGTTTATCAGTGCACTGCAGTTCTCTCTGTCACAGCTCACAGAAACATGATAATTTATCAGAGAGCAGGTCAGAGCCATTAACAGGATGGAATGAAGCCTTAGAAATGGATGATGAAGCCTAAAGCAATGATGATAACATCTTAATACAACGCTACGGCGCAGCTCTAGGAGGGTTATATGAAGAAAATGCctttaaatgctgttctgtgATCAGTTTTCCCAACATCTATTGACCAGAGAAGGTCCAGAAGTTTCTTGAAGCTTATAAACGCAAGGCAGAAGTGACACCAAAATGCTTTCAAGGGGCGTGACTGATCAGAGAGCATTGTGAGGCAATCTCAGCTGcttcaaccaatcagattagGGGTGGCTAATGAACAAACTCAGTCaagtaaaaacatgtattttactAGCATTTCTTTTCAAGGGGCCCTGTGTGTACAGGTTTACTTTCAGAAAAACTCATTTAGACTAACCAGACAGGTTTTCCACATTCAGATTCAGAAgctaaattaaacagaaaattcGTTGGAAATCCCCATTAGCAGTACACTTCACTGAAGCTCTAGttacaatatgtaaaaaataggGAAACTTTCACCACATATAAGATGAAATTCCCTTAAATGCAAAACAGCTCAATTGGTAGTAATGCCGCAAAGCATAAGGAAATATGGGGAAAGACTTGCTTTTAGATAATGTTTGTCAAGgccacattttttttcaatatttaaaataaatgataaaaccaGACAACAATAGTATAATAAGTTCTTCTTGTTGACCACCTATACCagtaaatgaatgtttttaatttaggaCTGCACATAAGAGACTAGTACAGAAAACCTGTATAAACAGTGGCCCTTTAGAAATAGGTCTAGTTtatatgtcattaaaaaaaattcaatattcaCCTCAGGGACTCCCATTTTCCTGCAGGCGTCCAAAAAGTTTTCGACGTTTCTGCGACATTTAGCCATGCTAAGCTTGGGCTGAGGGTTTTACGTATCCATCACTGCAGGGGATGGCACGTGGATACTGGCCACTGAACGTGGCCGAATGTGATTGACTAGATGACAGAGCACCACCCCATCCATGAGAGAAGAGCCCAGATCTTCAGGAAGAACTACTTTCAGTCTGCTCTCAATA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU102968 lncRNA upstream 60791 12457264 ~ 12457498 (+) True G69625
TU102960 lncRNA upstream 65924 12447329 ~ 12452365 (+) False epc2
TU102962 lncRNA upstream 66941 12445508 ~ 12451348 (+) True epc2
TU102902 lncRNA upstream 195757 12322251 ~ 12322532 (+) True G69578
TU102851 lncRNA upstream 317692 12199934 ~ 12200597 (+) True G69539
TU103092 lncRNA downstream 138139 12665012 ~ 12724840 (+) True G69706
TU103125 lncRNA downstream 246461 12773334 ~ 12773850 (+) True G69718
TU103127 lncRNA downstream 247085 12773958 ~ 12803408 (+) False LOC122351618
TU103126 lncRNA downstream 247123 12773996 ~ 12774685 (+) False LOC122351618
TU103136 lncRNA downstream 310846 12837719 ~ 12840151 (+) True G69723
XM_043249285.1 mRNA upstream 220 12514296 ~ 12518069 (+) False esd
XM_043249286.1 mRNA upstream 220 12514315 ~ 12518069 (+) False esd
XM_043249287.1 mRNA upstream 220 12514412 ~ 12518069 (+) True esd
XM_043248306.1 mRNA upstream 10802 12482174 ~ 12507487 (+) True htr2aa
XM_043249283.1 mRNA downstream 27740 12554613 ~ 12560394 (+) True rubcnl
XM_043249284.1 mRNA downstream 27740 12554613 ~ 12560394 (+) False rubcnl
XM_043248928.1 mRNA downstream 35586 12562459 ~ 12619422 (+) True dnah7
XM_043248827.1 mRNA downstream 205425 12732298 ~ 12774674 (+) True LOC122351618
XM_043249201.1 mRNA downstream 250697 12777570 ~ 12787437 (+) True LOC122351844
TU102836 other upstream 362485 12046499 ~ 12155804 (+) True G69527
TU102754 other upstream 1028293 11483437 ~ 11489996 (+) False LOC122352020
XR_006251850.1 other upstream 2123059 10328731 ~ 10395230 (+) False il1rapl1a
XR_006251853.1 other upstream 2961642 9443125 ~ 9556647 (+) False thsd7ba
XR_006251842.1 other upstream 3368628 9142592 ~ 9149661 (+) False si:ch1073-416j23.1
TU103038 other downstream 100662 12627535 ~ 12629535 (+) True G69670
XR_006251865.1 other downstream 203963 12730836 ~ 12730962 (+) True LOC122352187
TU103102 other downstream 205760 12732633 ~ 12741060 (+) False LOC122351618
TU103123 other downstream 245215 12772088 ~ 12773109 (+) False LOC122351618
TU103124 other downstream 245551 12772424 ~ 12773109 (+) False LOC122351618

Expression Profile