RNA id: TU103038


Basic Information

Item Value
RNA id TU103038
length 1505
RNA type TUCP
GC content 0.48
exon number 2
gene id G69670
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 12627535 ~ 12629535 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCTGGTGAAGGAAGCCATGTGCGTGTGATTTTACAGACAGATCTTCTCCTGGAACCTCTCTCCTGCCCCTCTGGGACTGAACAGGGCTGTGATTCTGATTGCTGTGGTCGTGGTCAACTTTGCTTTTCTCCAGCTCACCAGCCTGAGTAACACTGATGCTGGTCTTGTTGCGGCCTCGATGAGCTCTGGCTTTAGGTGGTCTGCCATTTCTTCTGGGTTGTGTGGTGGGTAGCTCAGTCGGAGCAGAAAGCTGTATTCTGGGTGTGAGATGTGGGGTTGCTGTGTTGTGCTCCACGCTGTCAGGACCATGGAGATGAGGGTGGGGATGCTTGTGGTGATGGTGGTCATGATGATGGTGGTTTTGGTCACTTAGATCATTATTTTCATGTGCATGTTCACTACTCTTTTGCTCAAGTTGACCATGGTCATCGTGGGTCTGAGGACTGTCTGTAACATGCCTGTGGATATGTTTGTGATCAGTGTCTTTCTCATGTTCATGTTCAGGGTCATGATCATGATCGTGATCATGATGCTCATGTTCATGGTCATGATCGTGATCGTGGTGATCATGTTCATGGTCATGATCATGTCTCTCAGATCCACTGTGAGTGGTGCTCTCGGCTCCGGTGCTTTTGCTGCACGGTAGCTCCTCGGTAGGACCGTgttgttcattttcatggtGGGAATGTTGATGGGTCTTGTGTGAGGTGTGGGGCTTCTGATGAAGATGCGGATGGCCCGCTGAATGCGAATGCCGACCTTCCTGAACCTCCAGAATATCTAAGTGTGCCACATGATCGTGGCCCAGATCTTCATGCTCAAGCCCGACCACGCGCACCTCACCCAGCCCTAAACTCAGCAGCAGACTCTGGAAGCCTTTAAAATCCAGACGATCCTTGTGGCCGTACCGACAGAACAACTGCATGATGTAGTAACGCTGCTCGTTCTCTGCAGGTTCACCATGGCTGCTGTGCACGAACTGGTCTGATAAACCATCGCAGGACAATTCTGAAATCTGCAGGTCACTGTGAACGTGGTCATGGTCTCCGTGGTTGTGCCCGTGGTGATGGTGGGACCCTCCTTCATGGCAGTGACTGCACTGATGATACAGCAGAGTCAGCACGCAGAGAAAGCAGAATCTGGGGGCTGATGGTTTCCCAGCTGGAAAAGTACTGAAGAGCCTTAATGGTCCCCCTACAGCAACTACTGTGAGCCTGGAGGGGAAAGTGTGATCAATCTGCTACTAAACAAAACAGATATCTCAGCAAGAGAAACAGTCTTTTCTTCGATCTGCATACAAGAGCCACAAATAAGAAATCTTTGTGAAACGGATCTGGGTGTGAGTGTTCCCAAAATTTTTATTCCAAAAGCACTgccatttttttccctgtaGCTTGTACTGCATGCTATATTACATTACTTGGTTGTAGCATATTAAACCAATAttcctttttctgttttctggtttataaaaaaaaaattatccaaataaaacaacattcgGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU103009 lncRNA upstream 100662 12518289 ~ 12526873 (+) False G69659
TU103010 lncRNA upstream 100662 12518289 ~ 12526873 (+) True G69659
TU103011 lncRNA upstream 103843 12518289 ~ 12523692 (+) False G69659
TU102968 lncRNA upstream 170037 12457264 ~ 12457498 (+) True G69625
TU102960 lncRNA upstream 175170 12447329 ~ 12452365 (+) False epc2
TU103092 lncRNA downstream 35477 12665012 ~ 12724840 (+) True G69706
TU103125 lncRNA downstream 143799 12773334 ~ 12773850 (+) True G69718
TU103127 lncRNA downstream 144423 12773958 ~ 12803408 (+) False LOC122351618
TU103126 lncRNA downstream 144461 12773996 ~ 12774685 (+) False LOC122351618
TU103136 lncRNA downstream 208184 12837719 ~ 12840151 (+) True G69723
XM_043248928.1 mRNA upstream 8113 12562459 ~ 12619422 (+) True dnah7
XM_043249283.1 mRNA upstream 67141 12554613 ~ 12560394 (+) True rubcnl
XM_043249284.1 mRNA upstream 67141 12554613 ~ 12560394 (+) False rubcnl
XM_043249285.1 mRNA upstream 109466 12514296 ~ 12518069 (+) False esd
XM_043249286.1 mRNA upstream 109466 12514315 ~ 12518069 (+) False esd
XM_043248827.1 mRNA downstream 102763 12732298 ~ 12774674 (+) True LOC122351618
XM_043249201.1 mRNA downstream 148035 12777570 ~ 12787437 (+) True LOC122351844
XM_043249203.1 mRNA downstream 149378 12778913 ~ 12787437 (+) False LOC122351844
XM_043249202.1 mRNA downstream 150899 12780434 ~ 12787437 (+) False LOC122351844
XM_043249204.1 mRNA downstream 159755 12789290 ~ 12811475 (+) True LOC122351846
TU102836 other upstream 471731 12046499 ~ 12155804 (+) True G69527
TU102754 other upstream 1137539 11483437 ~ 11489996 (+) False LOC122352020
XR_006251850.1 other upstream 2232305 10328731 ~ 10395230 (+) False il1rapl1a
XR_006251853.1 other upstream 3070888 9443125 ~ 9556647 (+) False thsd7ba
XR_006251841.1 other upstream 3477869 9142592 ~ 9149666 (+) False si:ch1073-416j23.1
XR_006251865.1 other downstream 101301 12730836 ~ 12730962 (+) True LOC122352187
TU103102 other downstream 103098 12732633 ~ 12741060 (+) False LOC122351618
TU103123 other downstream 142553 12772088 ~ 12773109 (+) False LOC122351618
TU103124 other downstream 142889 12772424 ~ 12773109 (+) False LOC122351618
TU103176 other downstream 355333 12984868 ~ 12985978 (+) True G69755

Expression Profile