RNA id: TU103123



Basic Information


Item Value
RNA id TU103123
length 754
RNA type TUCP
GC content 0.52
exon number 4
gene id LOC122351618
representative False

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 12732298 ~ 12803408 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCTGTAACAATGATTTGTTAAATTATAACGCGGATGTGTTATGAATGTGTCTCTGTGCAGGGTGGTGATCAGCCCACAGACTCTGGTCGGACGGTGCTGGATAACAAGACCTCTCTGCTAAATACTATGCCACTCCTCTCCTCGAGTCCCCGCCCAACAAGGGAATACCAGCCTGTCAGCTACTCGGACTCTTCTTTCACCTCCTCCCCTTTCAATAAAAGCCTGAAAGATGCAGACCAAGATGCAGAGTCCCTCACTGATGACAGCGGCGTGGACCAGTCTGAGGTGGTTGCTGAACTCCTGAAAGAGCTGTCGAATCACAGCGAGCGGGTAGAAGAGAGGAAAGCCGCTCTGTGTGAGCTAATGCGGCTGATCAGAGAAACGCAACTGCATGTTTGGGACGAGCACTTCAAAACCATCCTCCTGCTGCTCCTAGAAACACTCGGGGATGGAGAGCATGTCATTCGGGCATTAGCGCTGCGGGTGCTGAAGGAGATCTTAAACCGGCAGCCGTGGCGCTTTAAAAACTATGCGGAGCTCACCATTATGAAGACCCTAGAAGCACATAAAGACCCGCACAAAGAGGTGGTACGGGCTGCAGAAGAAGCAGCGGCTATGTTGGCGACCTCAATAAGTCCCGATCAGTGTATTAAGGTGTTGTGCCCCATCATCCAGTCGGCtgattaccccatcaacctagCTGCCATCAAAATGCTCACCAAAGTCATTGACCGGCTGCCCAAAGAGGGTCTCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU103092 lncRNA upstream 47248 12665012 ~ 12724840 (+) True G69706
TU103009 lncRNA upstream 245215 12518289 ~ 12526873 (+) False G69659
TU103010 lncRNA upstream 245215 12518289 ~ 12526873 (+) True G69659
TU103011 lncRNA upstream 248396 12518289 ~ 12523692 (+) False G69659
TU102968 lncRNA upstream 314590 12457264 ~ 12457498 (+) True G69625
TU103125 lncRNA downstream 225 12773334 ~ 12773850 (+) True G69718
TU103127 lncRNA downstream 849 12773958 ~ 12803408 (+) False LOC122351618
TU103126 lncRNA downstream 887 12773996 ~ 12774685 (+) False LOC122351618
TU103136 lncRNA downstream 64610 12837719 ~ 12840151 (+) True G69723
TU103208 lncRNA downstream 333171 13106280 ~ 13106757 (+) True G69783
XM_043248928.1 mRNA upstream 152666 12562459 ~ 12619422 (+) True dnah7
XM_043249283.1 mRNA upstream 211694 12554613 ~ 12560394 (+) True rubcnl
XM_043249284.1 mRNA upstream 211694 12554613 ~ 12560394 (+) False rubcnl
XM_043249286.1 mRNA upstream 254019 12514315 ~ 12518069 (+) False esd
XM_043249201.1 mRNA downstream 4461 12777570 ~ 12787437 (+) True LOC122351844
XM_043249203.1 mRNA downstream 5804 12778913 ~ 12787437 (+) False LOC122351844
XM_043249202.1 mRNA downstream 7325 12780434 ~ 12787437 (+) False LOC122351844
XM_043249204.1 mRNA downstream 16181 12789290 ~ 12811475 (+) True LOC122351846
XM_043249689.1 mRNA downstream 262784 13035893 ~ 13090342 (+) True tmeff2a
TU103102 other upstream 31028 12732633 ~ 12741060 (+) False LOC122351618
XR_006251865.1 other upstream 41126 12730836 ~ 12730962 (+) True LOC122352187
TU103038 other upstream 142553 12627535 ~ 12629535 (+) True G69670
TU102836 other upstream 616284 12046499 ~ 12155804 (+) True G69527
TU102754 other upstream 1282092 11483437 ~ 11489996 (+) False LOC122352020
TU103176 other downstream 211759 12984868 ~ 12985978 (+) True G69755
TU103175 other downstream 212062 12985171 ~ 12985978 (+) False G69755
unassigned_transcript_1466 other downstream 335306 13108415 ~ 13108496 (+) True trnas-cga_5
TU103281 other downstream 516584 13289693 ~ 13304591 (+) True G69834
unassigned_transcript_1467 other downstream 650605 13423714 ~ 13423826 (+) True trnal-caa

Expression Profile