RNA id: TU103144



Basic Information


Item Value
RNA id TU103144
length 670
RNA type TUCP
GC content 0.53
exon number 6
gene id LOC122351186
representative False

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 12707976 ~ 12720690 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GTCTGGACTTCCGGAGGCAAGGGCAGATCATGCGCACTGCTGCGTGGAGATGGGAGTGGACATGATTGAGGCCATCTCATTGGTGCGAGAGGTCACGGGAGTGAATGTGAACATGCGCGTGGGAATACATAGCGGCCGTGTGCACTGCGGGGTGCTCGGCCTACGCAAATGGCAGTTTGACGTGTGGTCCAACGATGTCACACTGGCCAACCAGATGGAGGCGGGAGGTCAAGCAGGGCGGATCCACATCACCAAAGCCACACTGCAGTATTTAAATGGTGACTATGAAGTGGAACCAGGTTTTGGAGGGGAGAGAAACGCATACTTGAAGGACAACAACATCGAGACGTTTTTTGTCCTGGGCTGCAGTCAGAAAAGGaaagaggaaaaagcAATGATGGCTAAGATGCAGCGTGCTAGAGCCAACTCTTCAGACGGTCTGATGTCGCGGTGGGTTCCTGACAGATCTTTCTCCAGGACTAAAGATTCCAAAGTCTTCAGACAGATGGGCATAGATGAAGCCTCCAGCAAAGATAACCGCTGCGCCCAGGAGGCCCTGAACCCGGAGGACGAGGTCGATGAGTTTTTAGGACGTGCCATCGATGCTCGAAGCATTGACCAGCTGCGGAAAGACCACGTCAAGAAGTTCCTGCTCACATTCCAAACAcct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU103090 lncRNA downstream 61629 12645836 ~ 12647002 (-) True G69704
TU103059 lncRNA downstream 126206 12518286 ~ 12582425 (-) False lrch1
TU102976 lncRNA downstream 279284 12425515 ~ 12429347 (-) True G69631
TU102990 lncRNA downstream 296796 12411507 ~ 12411835 (-) True G69645
TU102989 lncRNA downstream 301869 12406167 ~ 12406762 (-) True G69644
TU103148 lncRNA upstream 19217 12731041 ~ 12731743 (-) True G69733
TU103153 lncRNA upstream 61617 12773441 ~ 12773852 (-) True G69738
XR_006251806.1 lncRNA upstream 75291 12787115 ~ 12789134 (-) True LOC122351847
TU103184 lncRNA upstream 324132 13035956 ~ 13037453 (-) True G69762
XR_006251825.1 lncRNA upstream 516330 13228154 ~ 13232210 (-) True LOC122351987
XM_043248929.1 mRNA downstream 67763 12619276 ~ 12640868 (-) False slc39a10
XM_043248931.1 mRNA downstream 67773 12619276 ~ 12640858 (-) False slc39a10
XM_043248932.1 mRNA downstream 73572 12619276 ~ 12635059 (-) False slc39a10
XM_043248930.1 mRNA downstream 77510 12619276 ~ 12631121 (-) True slc39a10
XM_043249278.1 mRNA downstream 154581 12518284 ~ 12554050 (-) True lrch1
XM_043249565.1 mRNA upstream 11577 12723401 ~ 12729104 (-) True LOC122352069
XM_043248565.1 mRNA upstream 102329 12814153 ~ 12815138 (-) True LOC122351488
XM_043248427.1 mRNA upstream 402679 13114503 ~ 13118222 (-) False ftcdnl1
XM_043248426.1 mRNA upstream 402679 13114503 ~ 13118201 (-) False ftcdnl1
XM_043248425.1 mRNA upstream 402679 13114503 ~ 13117732 (-) True ftcdnl1
TU102995 other downstream 285185 12422429 ~ 12423446 (-) True G69650
XR_006251743.1 other downstream 518975 12166991 ~ 12189656 (-) True gtdc1
TU102802 other downstream 1209259 11497010 ~ 11499372 (-) False LOC122351308
XR_006251823.1 other downstream 2022004 10680158 ~ 10686627 (-) False mrasa
XR_006251803.1 other downstream 2189174 10515272 ~ 10519457 (-) False fdx1
XR_006251867.1 other upstream 26220 12738044 ~ 12738171 (-) True LOC122352189
TU103179 other upstream 273300 12985124 ~ 12985978 (-) True G69757
TU103524 other upstream 761316 13473140 ~ 13495645 (-) False gypc
TU103526 other upstream 761316 13473140 ~ 13495645 (-) False gypc
TU103924 other upstream 1095998 13807822 ~ 13813327 (-) True G70261

Expression Profile