RNA id: TU103176


Basic Information

Item Value
RNA id TU103176
length 534
RNA type TUCP
GC content 0.70
exon number 2
gene id G69755
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 12984868 ~ 12985978 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ccgtcccgttagcccgctggttccgcccagccgtcccgttagcccgctggttccgcccagccgtcccgttagcccgctggttccgcccagccgtcccgttcctgtgcccgcgccccgtgcgctccgtcccgttcctgtgcccgcgccccgtgcgctccgtcccgttcctgtgcccgcgccctgtgcgcttcctccagtgccgcctcaagttttcccaccctcccacccttgccacaccacgtcgatggatcccagcagcccctgcgctcatcctcagctcaccatccggagctcgccacgggtctgccggtctccatcgccgtcgagggtgaaggatccctcgcctcgccgtcctgcctccgagacccagactcctcctcggctcgtagacccgtcggctccccctgggctcctagctccctcctctacaccgtggtccgtcagtccaccagctccaccaggctccatcgtccctccggctccgccttggtctgtcgtcgaccatccgtcgcctcgggattcctctcctccggc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU103136 lncRNA upstream 144717 12837719 ~ 12840151 (+) True G69723
TU103127 lncRNA upstream 181460 12773958 ~ 12803408 (+) False LOC122351618
TU103126 lncRNA upstream 210183 12773996 ~ 12774685 (+) False LOC122351618
TU103125 lncRNA upstream 211018 12773334 ~ 12773850 (+) True G69718
TU103092 lncRNA upstream 260028 12665012 ~ 12724840 (+) True G69706
TU103208 lncRNA downstream 120302 13106280 ~ 13106757 (+) True G69783
TU103215 lncRNA downstream 121617 13107595 ~ 13107832 (+) True G69789
TU103228 lncRNA downstream 144120 13130098 ~ 13133839 (+) True G69796
TU103514 lncRNA downstream 529711 13515689 ~ 13518237 (+) True G69985
TU103566 lncRNA downstream 683128 13669106 ~ 13669444 (+) True G70021
XM_043249204.1 mRNA upstream 173393 12789290 ~ 12811475 (+) True LOC122351846
XM_043249201.1 mRNA upstream 197431 12777570 ~ 12787437 (+) True LOC122351844
XM_043249203.1 mRNA upstream 197431 12778913 ~ 12787437 (+) False LOC122351844
XM_043249202.1 mRNA upstream 197431 12780434 ~ 12787437 (+) False LOC122351844
XM_043248827.1 mRNA upstream 210194 12732298 ~ 12774674 (+) True LOC122351618
XM_043249689.1 mRNA downstream 49915 13035893 ~ 13090342 (+) True tmeff2a
XM_043249688.1 mRNA downstream 49926 13035904 ~ 13090342 (+) False tmeff2a
XM_043249598.1 mRNA downstream 108174 13094152 ~ 13106211 (+) True cavin2a
XM_043248432.1 mRNA downstream 123239 13109217 ~ 13112949 (+) False nabp1a
XM_043248430.1 mRNA downstream 123240 13109218 ~ 13112949 (+) True nabp1a
TU103123 other upstream 211759 12772088 ~ 12773109 (+) False LOC122351618
TU103124 other upstream 211759 12772424 ~ 12773109 (+) False LOC122351618
TU103102 other upstream 243808 12732633 ~ 12741060 (+) False LOC122351618
XR_006251865.1 other upstream 253906 12730836 ~ 12730962 (+) True LOC122352187
TU103038 other upstream 355333 12627535 ~ 12629535 (+) True G69670
unassigned_transcript_1466 other downstream 122437 13108415 ~ 13108496 (+) True trnas-cga_5
TU103281 other downstream 303715 13289693 ~ 13304591 (+) True G69834
unassigned_transcript_1467 other downstream 437736 13423714 ~ 13423826 (+) True trnal-caa
XR_006251758.1 other downstream 690185 13676163 ~ 13681991 (+) False ccnt2a
XR_006251807.1 other downstream 2415150 15401128 ~ 15425039 (+) False si:ch211-168k14.2

Expression Profile