RNA id: TU103184



Basic Information


Item Value
RNA id TU103184
length 794
lncRNA type inter_gene
GC content 0.55
exon number 2
gene id G69762
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 13035956 ~ 13037453 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AAGCTTTCAGACTTGACCAAAATATCGCCACTTGTTCACGCGCTGCATAACTTCAGGGACGAGAAGTTTAGCCGTCTTCCGTTGCCAAGGGAACGTCAAACCTTATTCCTTTCAACGGACTTCTTGAACATCTTACCCGAGCAATTCCATCCAGTCGGAGTCTGACAGTCGCTGAGTGAGGACGGGAAAGCGCCAAGTTGTTGTACCGGGAAAGTGGCTAGAAAGGACAAGACTGCAATCCATACCCAGTGTCCCACTATCCGGCTCCACTGGTGCGGACTTCGGGGCTCGTGTAGGGCCGCCGCCACCGTGACACCCATCTCAGTTCCCCCGACGCTGCTCGCAGACGCGCAACGACAGCCCTGGTCCTGGTGTTGTCAACTTTGCCGGTGAGCTTAGAAGCCAAGACAGGGACATTTTCCGACGGACGGAGTGTGCCCCATGAAGCAGTTGTTTCTAGGTGACCAGAGCGAGGATCCGCCCGAAGCGAGAGGGTGCAGATGCGGAATGAGAGAGGTCCGGGTGCGATGACAGGGGAGGGATGGTGTCGGGAGGGAAGTGGGTGAGCGAGATGTTCAAAAAGCGAGGCAAGAATAAAAAGACGCGAGGGGTGTTTTTAAGAAACAGAAgtgaggcaaaaaaaaaaatcatacatccCATTCGAGTGACATGCCGAAGTTACAACATCCACTGAGGCGCGGCTTAGAGAGACTGTCCTCGGTCCTCACTCCGTGCGCTCGCGGAGAGCCGTGAGTTTGTCAGAGTCTCGCGGAGGGCCATTCCTCTGTACCTGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006251806.1 lncRNA downstream 246822 12787115 ~ 12789134 (-) True LOC122351847
TU103153 lncRNA downstream 262104 12773441 ~ 12773852 (-) True G69738
TU103148 lncRNA downstream 304213 12731041 ~ 12731743 (-) True G69733
TU103090 lncRNA downstream 388954 12645836 ~ 12647002 (-) True G69704
TU103059 lncRNA downstream 453531 12518286 ~ 12582425 (-) False lrch1
XR_006251825.1 lncRNA upstream 190701 13228154 ~ 13232210 (-) True LOC122351987
TU103357 lncRNA upstream 193414 13230867 ~ 13232202 (-) False LOC122351987
TU103390 lncRNA upstream 264950 13302403 ~ 13327413 (-) True G69888
TU103400 lncRNA upstream 273420 13310873 ~ 13325669 (-) True G69896
TU103479 lncRNA upstream 374359 13411812 ~ 13412439 (-) True G69953
XM_043248565.1 mRNA downstream 220818 12814153 ~ 12815138 (-) True LOC122351488
XM_043249565.1 mRNA downstream 306852 12723401 ~ 12729104 (-) True LOC122352069
XM_043248079.1 mRNA downstream 315266 12707976 ~ 12720690 (-) True LOC122351186
XM_043248931.1 mRNA downstream 395098 12619276 ~ 12640858 (-) False slc39a10
XM_043248427.1 mRNA upstream 77050 13114503 ~ 13118222 (-) False ftcdnl1
XM_043248426.1 mRNA upstream 77050 13114503 ~ 13118201 (-) False ftcdnl1
XM_043248425.1 mRNA upstream 77050 13114503 ~ 13117732 (-) True ftcdnl1
XM_043248428.1 mRNA upstream 77050 13114503 ~ 13117723 (-) False ftcdnl1
XM_043248954.1 mRNA upstream 92596 13130049 ~ 13137972 (-) True stk17b
TU103179 other downstream 49978 12985124 ~ 12985978 (-) True G69757
XR_006251867.1 other downstream 297785 12738044 ~ 12738171 (-) True LOC122352189
TU103144 other downstream 324132 12708631 ~ 12711824 (-) False LOC122351186
TU102995 other downstream 612510 12422429 ~ 12423446 (-) True G69650
XR_006251743.1 other downstream 846300 12166991 ~ 12189656 (-) True gtdc1
TU103524 other upstream 435687 13473140 ~ 13495645 (-) False gypc
TU103526 other upstream 435687 13473140 ~ 13495645 (-) False gypc
TU103924 other upstream 770369 13807822 ~ 13813327 (-) True G70261
TU103993 other upstream 900806 13938259 ~ 13939868 (-) True G70294
TU104031 other upstream 1159026 14196479 ~ 14253776 (-) True G70317

Expression Profile