Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU103479 |
| length | 372 |
| lncRNA type | inter_gene |
| GC content | 0.60 |
| exon number | 2 |
| gene id | G69953 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056707.1 |
| NCBI id | CM032076.1 |
| chromosome length | 26426558 |
| location | 13411812 ~ 13412439 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0019219 | regulation of nucleobase-containing compound metabolic process | biological_process |
| GO:0080090 | regulation of primary metabolic process | biological_process |
| GO:0006351 | transcription, DNA-templated | biological_process |
| GO:0065009 | regulation of molecular function | biological_process |
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0051171 | regulation of nitrogen compound metabolic process | biological_process |
| GO:0009889 | regulation of biosynthetic process | biological_process |
| GO:0097659 | nucleic acid-templated transcription | biological_process |
| GO:0031323 | regulation of cellular metabolic process | biological_process |
| GO:0031326 | regulation of cellular biosynthetic process | biological_process |
| GO:0051252 | regulation of RNA metabolic process | biological_process |
| GO:1903506 | regulation of nucleic acid-templated transcription | biological_process |
| GO:0010468 | regulation of gene expression | biological_process |
| GO:0060255 | regulation of macromolecule metabolic process | biological_process |
| GO:2001141 | regulation of RNA biosynthetic process | biological_process |
| GO:0032774 | RNA biosynthetic process | biological_process |
| GO:0010556 | regulation of macromolecule biosynthetic process | biological_process |
| GO:0051090 | regulation of DNA-binding transcription factor activity | biological_process |
| GO:2000112 | regulation of cellular macromolecule biosynthetic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU103390 | lncRNA | downstream | 84399 | 13302403 ~ 13327413 (-) | True | G69888 |
| TU103400 | lncRNA | downstream | 86143 | 13310873 ~ 13325669 (-) | True | G69896 |
| XR_006251825.1 | lncRNA | downstream | 179602 | 13228154 ~ 13232210 (-) | True | LOC122351987 |
| TU103357 | lncRNA | downstream | 179610 | 13230867 ~ 13232202 (-) | False | LOC122351987 |
| TU103184 | lncRNA | downstream | 374359 | 13035956 ~ 13037453 (-) | True | G69762 |
| TU103525 | lncRNA | upstream | 60701 | 13473140 ~ 13495645 (-) | False | gypc |
| TU103573 | lncRNA | upstream | 257364 | 13669803 ~ 13673807 (-) | False | tmem163a |
| TU103577 | lncRNA | upstream | 262279 | 13674718 ~ 13675514 (-) | True | G70027 |
| TU103589 | lncRNA | upstream | 266941 | 13679380 ~ 13682139 (-) | True | G70033 |
| TU103926 | lncRNA | upstream | 403272 | 13815711 ~ 13816743 (-) | True | G70263 |
| XM_043249085.1 | mRNA | downstream | 1413 | 13400252 ~ 13410399 (-) | True | ints6 |
| XM_043248869.1 | mRNA | downstream | 48897 | 13354751 ~ 13362915 (-) | True | cops8 |
| XM_043248870.1 | mRNA | downstream | 48898 | 13358826 ~ 13362914 (-) | False | cops8 |
| XM_043249431.1 | mRNA | downstream | 160153 | 13236681 ~ 13251659 (-) | True | mlphb |
| XM_043249436.1 | mRNA | downstream | 175628 | 13235407 ~ 13236184 (-) | True | prlh |
| XM_043248842.1 | mRNA | upstream | 7576 | 13420015 ~ 13424845 (-) | True | dhrs12 |
| XM_043248838.1 | mRNA | upstream | 21526 | 13433965 ~ 13444172 (-) | True | parp14rs1 |
| XM_043248171.1 | mRNA | upstream | 37431 | 13449870 ~ 13454850 (-) | False | faima |
| XM_043248170.1 | mRNA | upstream | 37431 | 13449870 ~ 13454698 (-) | True | faima |
| XM_043248890.1 | mRNA | upstream | 60696 | 13473135 ~ 13495667 (-) | True | gypc |
| TU103179 | other | downstream | 425834 | 12985124 ~ 12985978 (-) | True | G69757 |
| XR_006251867.1 | other | downstream | 673641 | 12738044 ~ 12738171 (-) | True | LOC122352189 |
| TU103144 | other | downstream | 699988 | 12708631 ~ 12711824 (-) | False | LOC122351186 |
| TU102995 | other | downstream | 988366 | 12422429 ~ 12423446 (-) | True | G69650 |
| XR_006251743.1 | other | downstream | 1222156 | 12166991 ~ 12189656 (-) | True | gtdc1 |
| TU103524 | other | upstream | 60701 | 13473140 ~ 13495645 (-) | False | gypc |
| TU103526 | other | upstream | 60701 | 13473140 ~ 13495645 (-) | False | gypc |
| TU103924 | other | upstream | 395383 | 13807822 ~ 13813327 (-) | True | G70261 |
| TU103993 | other | upstream | 525820 | 13938259 ~ 13939868 (-) | True | G70294 |
| TU104031 | other | upstream | 784040 | 14196479 ~ 14253776 (-) | True | G70317 |
