RNA id: TU103926


Basic Information

Item Value
RNA id TU103926
length 1033
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G70263
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 13815711 ~ 13816743 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCACTCCATCACTAGCGTTCCTTACCTGATCAAAAGCCTGATCTATGCTGTCCTGCAGGTGCTCTGTAAACCTGTCATTGACATCTATGAGCTCTTGAACATTGCTGAAGACCACAGCCAGCTGCTCTGCTGTGAGCAGCCCTGCACTCTGCATGGGGCAGTAAAACTCTTCCTTGATGATTCGCAGGTCTTCTCCATAACTCGACTCAGTGTTGAGAAACTCTAGGATGGCCTCTTTGCGCTCTGTGCGTAACTTAGAGCAGCGTTCACACATGCTTTCCTCGCGGGCGCCCTCTTTGTGTCCACAGTCGGGACAGGGCTGCTGAGCGTCCCAGGCCCTGAGGGACGGCGAGGGTCTCCTCCAGCCCCGAGCCAATCCAGGGCCGATGCCGCTGTCCACGCGCTCTACCTCGGCTCCGGCGCTGTGGCGGGTGCGACGGGGCTCTTCTTCATCTTCACGCTCATCGCTCAAGCCCACCACACCGCTGTCTGCGCTCAGGCTGCTGACGGTGCTCCAGCGGTGCTGCGCCGAGCGGCTCACACCCAGGCCCCTGCTCCTCTCCTCACCTCTGGGCTCAGAGCGGCCCCTGGTTGTGCCTGGCACTGATGACAAAGAACAAACAGACCTCTGAAGATCAGCTCTCAGAATTTCATAACAATAGTTACATTAATAACATACAGATAATCAAGAAAAgctaataaaactgtaaaaaaccCGCTTGAAACAAAAAGAGACCAGAAATAACAGCAAAAATTCACTtgaatattgtaatatttaagacAATACATTTGAGGTTTTGTGAAATTTGCACATATCATACCTTTACAAACACTTCATACCTGTACATACTTGAatgtctatattatatatagctatttttaaagaatgtgagacagcatttatttgaaaagcaattttattttaatatattttaaaatgtaatttattcctatgatgatgaagctgaattttcagcagcccttgggcttcagtgtcacatgatccttgagaaataattctaatatgctgatt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU103589 lncRNA downstream 133572 13679380 ~ 13682139 (-) True G70033
TU103577 lncRNA downstream 140197 13674718 ~ 13675514 (-) True G70027
TU103573 lncRNA downstream 141904 13669803 ~ 13673807 (-) False tmem163a
TU103525 lncRNA downstream 320066 13473140 ~ 13495645 (-) False gypc
TU103479 lncRNA downstream 403272 13411812 ~ 13412439 (-) True G69953
TU103938 lncRNA upstream 18503 13835246 ~ 13835699 (-) True G70271
TU103939 lncRNA upstream 20567 13837310 ~ 13837600 (-) True G70272
TU103987 lncRNA upstream 42253 13858996 ~ 13859401 (-) True G70290
TU103976 lncRNA upstream 43040 13859783 ~ 13866148 (-) True G70288
TU103986 lncRNA upstream 44779 13861522 ~ 13861935 (-) True G70289
XM_043248470.1 mRNA downstream 28583 13783785 ~ 13787128 (-) True eaf2
XM_043248469.1 mRNA downstream 32259 13777626 ~ 13783452 (-) True si:dkey-91i10.3
XM_043249524.1 mRNA downstream 50385 13760324 ~ 13765326 (-) True mmadhcb
XM_043248515.1 mRNA downstream 121524 13684985 ~ 13694187 (-) True LOC122351432
XM_043249058.1 mRNA downstream 144229 13642303 ~ 13671482 (-) True tmem163a
XM_043249528.1 mRNA upstream 4656 13821399 ~ 13823785 (-) True tsn
XM_043248863.1 mRNA upstream 79028 13895771 ~ 13912943 (-) False rif1
XM_043248404.1 mRNA upstream 97131 13913874 ~ 13921597 (-) True tnfaip6
XM_043248526.1 mRNA upstream 109170 13925913 ~ 13961097 (-) True itgb5
XM_043248144.1 mRNA upstream 145014 13961757 ~ 13972062 (-) False rbm44
TU103924 other downstream 2384 13807822 ~ 13813327 (-) True G70261
TU103524 other downstream 320066 13473140 ~ 13495645 (-) False gypc
TU103526 other downstream 320066 13473140 ~ 13495645 (-) False gypc
TU103179 other downstream 829733 12985124 ~ 12985978 (-) True G69757
XR_006251867.1 other downstream 1077540 12738044 ~ 12738171 (-) True LOC122352189
TU103993 other upstream 121516 13938259 ~ 13939868 (-) True G70294
TU104031 other upstream 379736 14196479 ~ 14253776 (-) True G70317
TU104362 other upstream 1486360 15303103 ~ 15305975 (-) True G70549
XR_006251733.1 other upstream 1573106 15389849 ~ 15399437 (-) False tmtc4
TU104521 other upstream 1954678 15771421 ~ 15771864 (-) True G70663

Expression Profile