RNA id: TU103939



Basic Information


Item Value
RNA id TU103939
length 291
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G70272
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 13837310 ~ 13837600 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCTTACCCTATCGATAAGCTGCAAATtatgttgtagttaatagttggTCAAGAGTGAGAATTGGTTTCCAAGCTAAAGTCTGACTAATTTAAAAGTTatcactttttacagtgtacaggATGTAAAGTGATACTATAAGAACAGGTAAAAACACGTACTACTGTGCTTATAAACAATTCTTCAGCGCAGTGGCATGAGGCTTTGAAGCTTAGtcattggggaaaaaaaactgtctgaACAGCTGAGGATGAGTATTTAAACACCTTGGATGACTCCTcgtttaaataaaac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU103938 lncRNA downstream 1611 13835246 ~ 13835699 (-) True G70271
TU103926 lncRNA downstream 20567 13815711 ~ 13816743 (-) True G70263
TU103589 lncRNA downstream 155171 13679380 ~ 13682139 (-) True G70033
TU103577 lncRNA downstream 161796 13674718 ~ 13675514 (-) True G70027
TU103573 lncRNA downstream 163503 13669803 ~ 13673807 (-) False tmem163a
TU103987 lncRNA upstream 21396 13858996 ~ 13859401 (-) True G70290
TU103976 lncRNA upstream 22183 13859783 ~ 13866148 (-) True G70288
TU103986 lncRNA upstream 23922 13861522 ~ 13861935 (-) True G70289
TU104004 lncRNA upstream 35106 13872706 ~ 13873011 (-) True G70303
TU104006 lncRNA upstream 35918 13873518 ~ 13876466 (-) True G70305
XM_043249528.1 mRNA downstream 13525 13821399 ~ 13823785 (-) True tsn
XM_043248470.1 mRNA downstream 50182 13783785 ~ 13787128 (-) True eaf2
XM_043248469.1 mRNA downstream 53858 13777626 ~ 13783452 (-) True si:dkey-91i10.3
XM_043249524.1 mRNA downstream 71984 13760324 ~ 13765326 (-) True mmadhcb
XM_043248515.1 mRNA downstream 143123 13684985 ~ 13694187 (-) True LOC122351432
XM_043248863.1 mRNA upstream 58171 13895771 ~ 13912943 (-) False rif1
XM_043248404.1 mRNA upstream 76274 13913874 ~ 13921597 (-) True tnfaip6
XM_043248526.1 mRNA upstream 88313 13925913 ~ 13961097 (-) True itgb5
XM_043248144.1 mRNA upstream 124157 13961757 ~ 13972062 (-) False rbm44
XM_043248143.1 mRNA upstream 124157 13961757 ~ 13972062 (-) True rbm44
TU103924 other downstream 23983 13807822 ~ 13813327 (-) True G70261
TU103524 other downstream 341665 13473140 ~ 13495645 (-) False gypc
TU103526 other downstream 341665 13473140 ~ 13495645 (-) False gypc
TU103179 other downstream 851332 12985124 ~ 12985978 (-) True G69757
XR_006251867.1 other downstream 1099139 12738044 ~ 12738171 (-) True LOC122352189
TU103993 other upstream 100659 13938259 ~ 13939868 (-) True G70294
TU104031 other upstream 358879 14196479 ~ 14253776 (-) True G70317
TU104362 other upstream 1465503 15303103 ~ 15305975 (-) True G70549
XR_006251733.1 other upstream 1552249 15389849 ~ 15399437 (-) False tmtc4
TU104521 other upstream 1933821 15771421 ~ 15771864 (-) True G70663

Expression Profile