RNA id: TU104007



Basic Information


Item Value
RNA id TU104007
length 311
lncRNA type inter_gene
GC content 0.47
exon number 3
gene id G70305
representative False

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 13873518 ~ 13876466 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATCGCTGGCATTGAGGTAGGCTTTCTTGGAACGAACCAGGATTGGTGTGTCATGGATGGGAGTATACTTGTGCTTCATCTTCTCATACTGTTCCTTGTATTTTTTTCACTGTACACCACTTTCATGGAACGGGCATGATCCAAAATGGGAGTGTGTGATTCTGGGGTGAAGAAGGCCCTCTCCTTGGATGCCAGATCAATGTACTTGAACTGTGTCAGACTCTGTGCCCACTTGGCTCTCTTAATTTCCAAGCCATCCACAGTGGTGGTGCATTTGGCTTTTTCCTTATTGCCCTCAGCTCGGTACACAAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU104004 lncRNA downstream 507 13872706 ~ 13873011 (-) True G70303
TU103976 lncRNA downstream 7370 13859783 ~ 13866148 (-) True G70288
TU103986 lncRNA downstream 11583 13861522 ~ 13861935 (-) True G70289
TU103987 lncRNA downstream 14117 13858996 ~ 13859401 (-) True G70290
TU103939 lncRNA downstream 35918 13837310 ~ 13837600 (-) True G70272
TU104009 lncRNA upstream 3516 13878124 ~ 13878412 (-) True G70306
TU103895 lncRNA upstream 4962 13879570 ~ 13895460 (-) True rif1
TU103897 lncRNA upstream 7142 13881750 ~ 13911853 (-) False rif1
TU103893 lncRNA upstream 16738 13891346 ~ 13895460 (-) False rif1
TU103898 lncRNA upstream 16738 13891346 ~ 13895460 (-) False rif1
XM_043249528.1 mRNA downstream 49733 13821399 ~ 13823785 (-) True tsn
XM_043248470.1 mRNA downstream 86390 13783785 ~ 13787128 (-) True eaf2
XM_043248469.1 mRNA downstream 90066 13777626 ~ 13783452 (-) True si:dkey-91i10.3
XM_043249524.1 mRNA downstream 108192 13760324 ~ 13765326 (-) True mmadhcb
XM_043248515.1 mRNA downstream 179331 13684985 ~ 13694187 (-) True LOC122351432
XM_043248863.1 mRNA upstream 21163 13895771 ~ 13912943 (-) False rif1
XM_043248404.1 mRNA upstream 39266 13913874 ~ 13921597 (-) True tnfaip6
XM_043248526.1 mRNA upstream 51305 13925913 ~ 13961097 (-) True itgb5
XM_043248144.1 mRNA upstream 87149 13961757 ~ 13972062 (-) False rbm44
XM_043248143.1 mRNA upstream 87149 13961757 ~ 13972062 (-) True rbm44
TU103924 other downstream 60191 13807822 ~ 13813327 (-) True G70261
TU103524 other downstream 377873 13473140 ~ 13495645 (-) False gypc
TU103526 other downstream 377873 13473140 ~ 13495645 (-) False gypc
TU103179 other downstream 887540 12985124 ~ 12985978 (-) True G69757
XR_006251867.1 other downstream 1135347 12738044 ~ 12738171 (-) True LOC122352189
TU103993 other upstream 63651 13938259 ~ 13939868 (-) True G70294
TU104031 other upstream 321871 14196479 ~ 14253776 (-) True G70317
TU104362 other upstream 1428495 15303103 ~ 15305975 (-) True G70549
XR_006251733.1 other upstream 1515241 15389849 ~ 15399437 (-) False tmtc4
TU104521 other upstream 1896813 15771421 ~ 15771864 (-) True G70663

Expression Profile