RNA id: TU104214



Basic Information


Item Value
RNA id TU104214
length 585
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G70438
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 14916800 ~ 14918840 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCAGACAGCACCGTGGATTTCTTCTTTGTCCCACTGAACTTTAGTGCGACAGGGACTGCTCAACTTCCTGTCCCAAAGGGCCTGCACCTCTTTTGAGCACTGACAGACTTCCTGGTAATCCAGCTTCATTTTACGAATGTGCAATTCATCACGGCTGGCTGCAGGGAGGAAAAATGCTAGTGAGATTTTTATTTACTCAGAACAGCTGACACATGAATGCATTGCTATTATGTTCTAAAAGCATTCTAGGtgtcaaaatgaaatgatacATCATGTGCATCACCTGCTCTTACcacagagacagagggagatTCTTTGTCAGTGGTTCTCAAGTGTTAAGGTGTGACCCAAAAATGTGGACAGAAGGGGAAAACGCTGCCAACAGGCGCTGGTTCTCTTTCTCCATGCGGATGAGCAAAATCTGTTGGTGGATGGCTTTCTTCCACAGGGCCCTGTAGTCAGCTGGACTGCGCTGGCCCTTCTCTCCACCAAAGCCCTGCTCTGGGGACAGGGGGCTGACCTGAGGGTCTTGATCCTGGTTCAAAGCCCGAGGAGAAAGTGGCAGCAGCTCCCGGCCATCCATGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU104140 lncRNA downstream 321458 14594263 ~ 14595342 (-) True G70396
TU104139 lncRNA downstream 321458 14594424 ~ 14595342 (-) False G70396
TU104132 lncRNA downstream 326525 14589858 ~ 14590275 (-) True G70393
TU104117 lncRNA downstream 353808 14477332 ~ 14562992 (-) True G70382
TU104075 lncRNA downstream 544126 14363039 ~ 14372674 (-) False LOC122351495
XR_006251854.1 lncRNA upstream 18284 14937124 ~ 14942863 (-) True LOC122352110
TU104296 lncRNA upstream 56572 14975412 ~ 14981853 (-) True G70494
TU104307 lncRNA upstream 94517 15013357 ~ 15273029 (-) False G70503
XR_006251790.1 lncRNA upstream 115979 15034819 ~ 15040823 (-) True LOC122351681
TU104311 lncRNA upstream 117242 15036082 ~ 15041730 (-) False LOC122351681
XM_043249515.1 mRNA downstream 18675 14884111 ~ 14898125 (-) True morc3a
XM_043249516.1 mRNA downstream 22683 14884111 ~ 14894117 (-) False morc3a
XM_043249517.1 mRNA downstream 39144 14875492 ~ 14877656 (-) True vtcn1
XM_043248126.1 mRNA downstream 42108 14868759 ~ 14874692 (-) True trim45
XM_043248891.1 mRNA downstream 54708 14795431 ~ 14862092 (-) True man1a2
XM_043248244.1 mRNA upstream 82624 15001464 ~ 15006670 (-) True klf5b
XM_043249094.1 mRNA upstream 238264 15157104 ~ 15161278 (-) True gpr18
XM_043249093.1 mRNA upstream 245459 15164299 ~ 15170670 (-) False gpr183a
XM_043249091.1 mRNA upstream 245459 15164299 ~ 15170496 (-) False gpr183a
XM_043249092.1 mRNA upstream 245459 15164299 ~ 15170119 (-) True gpr183a
TU104031 other downstream 663024 14196479 ~ 14253776 (-) True G70317
TU103993 other downstream 976932 13938259 ~ 13939868 (-) True G70294
TU103924 other downstream 1103473 13807822 ~ 13813327 (-) True G70261
TU103524 other downstream 1421155 13473140 ~ 13495645 (-) False gypc
TU104362 other upstream 384263 15303103 ~ 15305975 (-) True G70549
XR_006251733.1 other upstream 471009 15389849 ~ 15399437 (-) False tmtc4
TU104521 other upstream 852581 15771421 ~ 15771864 (-) True G70663
TU104983 other upstream 1898300 16817140 ~ 16823694 (-) False G70986
TU104984 other upstream 1898300 16817140 ~ 16823775 (-) True G70986

Expression Profile