RNA id: TU104296



Basic Information


Item Value
RNA id TU104296
length 442
lncRNA type inter_gene
GC content 0.56
exon number 2
gene id G70494
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 14975412 ~ 14981853 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CTGGCACTTGGCCTCGTCCAGGAGAGGTAACATGATGGTGGAGTTGAGGGTTGACGGAGAGCGAACGGCTGTGGTGTACATGAGGGGTAGCGACTGCACCACCACCGGGATACGGTGCACCTGGCTGGGAAGTTTACTGGGGCTGGAAGGAGGAACGGGGTGGATGATGTGCAAAAATTGCTGGCCTCTAACTCCATGAGAAGAGCCCACCAAGGGCCCGGGCGTCAAAACGGAGGACATTCCCGAGGAGACTGAGGTGATGACGGAAGGTGAGGATGACGATGATGAAGATGGAGAAAAGGCTGAGGTAATGGGTGAGGTGTTGGAGGAAGGAGATGATGTCCTCGTCTTGTTGATGGACAGGTCTACGGGTTCTGTCTGGGTCTGGAATTGGTCGGATGAGAGCAGGTCTTCAGGAGGTTCTGCCCTGTTATTGATGGCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006251854.1 lncRNA downstream 32549 14937124 ~ 14942863 (-) True LOC122352110
TU104213 lncRNA downstream 56572 14916800 ~ 14918840 (-) False G70438
TU104214 lncRNA downstream 56572 14916800 ~ 14918840 (-) True G70438
TU104140 lncRNA downstream 380070 14594263 ~ 14595342 (-) True G70396
TU104139 lncRNA downstream 380070 14594424 ~ 14595342 (-) False G70396
TU104307 lncRNA upstream 31504 15013357 ~ 15273029 (-) False G70503
XR_006251790.1 lncRNA upstream 52966 15034819 ~ 15040823 (-) True LOC122351681
TU104311 lncRNA upstream 54229 15036082 ~ 15041730 (-) False LOC122351681
TU104306 lncRNA upstream 246443 15228296 ~ 15275841 (-) False G70503
TU104358 lncRNA upstream 275135 15256988 ~ 15260906 (-) False LOC122351294
XM_043249515.1 mRNA downstream 77287 14884111 ~ 14898125 (-) True morc3a
XM_043249516.1 mRNA downstream 81295 14884111 ~ 14894117 (-) False morc3a
XM_043249517.1 mRNA downstream 97756 14875492 ~ 14877656 (-) True vtcn1
XM_043248126.1 mRNA downstream 100720 14868759 ~ 14874692 (-) True trim45
XM_043248891.1 mRNA downstream 113320 14795431 ~ 14862092 (-) True man1a2
XM_043248244.1 mRNA upstream 19611 15001464 ~ 15006670 (-) True klf5b
XM_043249094.1 mRNA upstream 175251 15157104 ~ 15161278 (-) True gpr18
XM_043249093.1 mRNA upstream 182446 15164299 ~ 15170670 (-) False gpr183a
XM_043249091.1 mRNA upstream 182446 15164299 ~ 15170496 (-) False gpr183a
XM_043249092.1 mRNA upstream 182446 15164299 ~ 15170119 (-) True gpr183a
TU104031 other downstream 721636 14196479 ~ 14253776 (-) True G70317
TU103993 other downstream 1035544 13938259 ~ 13939868 (-) True G70294
TU103924 other downstream 1162085 13807822 ~ 13813327 (-) True G70261
TU103524 other downstream 1479767 13473140 ~ 13495645 (-) False gypc
TU104362 other upstream 321250 15303103 ~ 15305975 (-) True G70549
XR_006251733.1 other upstream 407996 15389849 ~ 15399437 (-) False tmtc4
TU104521 other upstream 789568 15771421 ~ 15771864 (-) True G70663
TU104983 other upstream 1835287 16817140 ~ 16823694 (-) False G70986
TU104984 other upstream 1835287 16817140 ~ 16823775 (-) True G70986

Expression Profile