RNA id: TU104521



Basic Information


Item Value
RNA id TU104521
length 444
RNA type TUCP
GC content 0.53
exon number 1
gene id G70663
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 15771421 ~ 15771864 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ACCAATGGAACCAGGATGAGACAACAGGTACCTCAACCCTGTCACCCAGATGTTGGCTACATCCGCAGAAAGTGCAACCAGGTCCAGGGACTGATACTCGTCACCGTGAATGATGGAGAAGGCTGCTTCTTCAGCAAGGTGCTCCGATGGACCATTGTGGAGAAAGGTCTCTGTGCTTTTCCCTGTGCGGACCTCACGAATAGCAGAGATATCAAGTCGAGCTCGGTCACCATCTTTCTTGGAGGGTTCCCAACGGAGGCAGGCCAGCTCTGGATCTAGAGTGTAGAATCTAGAGTAGATGCGCGAGTTGGGTCGCACCTTCTTTAGCTCGCAGCCACCCTGCATGAAGGCCAGGCAGTCTGCAGCACTGCTCACTTTCTTTTCAGATGGCATACTGCTGAAGGAAACAGTTTTCTTTCTCCCACCACTGACCTTGGCCACTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU104518 lncRNA downstream 8752 15762383 ~ 15762669 (-) True G70660
TU104479 lncRNA downstream 127145 15642259 ~ 15644276 (-) True G70633
XR_006251775.1 lncRNA downstream 132985 15628883 ~ 15638436 (-) True LOC122351574
TU104406 lncRNA downstream 349844 15418999 ~ 15421577 (-) True G70581
TU104306 lncRNA downstream 495580 15228296 ~ 15275841 (-) False G70503
XR_006251840.1 lncRNA upstream 176249 15948113 ~ 15953976 (-) True LOC122352066
TU104861 lncRNA upstream 346418 16118282 ~ 16120319 (-) True G70894
XR_006251709.1 lncRNA upstream 833503 16605367 ~ 16631420 (-) False LOC122351188
XR_006251710.1 lncRNA upstream 833503 16605367 ~ 16617024 (-) True LOC122351188
TU104934 lncRNA upstream 838406 16610270 ~ 16610561 (-) True G70955
XM_043248898.1 mRNA downstream 42621 15716322 ~ 15728800 (-) True rftn2
XM_043248422.1 mRNA downstream 63757 15701915 ~ 15707664 (-) True hspd1
XM_043249076.1 mRNA downstream 78806 15682700 ~ 15692615 (-) False sf3b1
XM_043249078.1 mRNA downstream 80137 15682700 ~ 15691284 (-) False sf3b1
XM_043249077.1 mRNA downstream 80280 15682700 ~ 15691141 (-) True sf3b1
XM_043249428.1 mRNA upstream 62675 15834539 ~ 15876097 (-) False satb2
XM_043249429.1 mRNA upstream 62675 15834539 ~ 15874885 (-) False satb2
XM_043249426.1 mRNA upstream 62675 15834539 ~ 15874885 (-) False satb2
XM_043249425.1 mRNA upstream 62675 15834539 ~ 15874885 (-) True satb2
XM_043249427.1 mRNA upstream 62675 15834539 ~ 15874884 (-) False satb2
XR_006251733.1 other downstream 371984 15389849 ~ 15399437 (-) False tmtc4
TU104362 other downstream 465446 15303103 ~ 15305975 (-) True G70549
TU104031 other downstream 1517645 14196479 ~ 14253776 (-) True G70317
TU103993 other downstream 1831553 13938259 ~ 13939868 (-) True G70294
TU103924 other downstream 1958094 13807822 ~ 13813327 (-) True G70261
TU104983 other upstream 1045276 16817140 ~ 16823694 (-) False G70986
TU104984 other upstream 1045276 16817140 ~ 16823775 (-) True G70986
TU105258 other upstream 1464008 17235872 ~ 17255491 (-) True G71118
XR_006251863.1 other upstream 2797891 18569755 ~ 18569882 (-) True LOC122352185
TU106113 other upstream 3948634 19720498 ~ 19721737 (-) False ankar

Expression Profile