RNA id: TU104935



Basic Information


Item Value
RNA id TU104935
length 308
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G70956
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 16613117 ~ 16613424 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ttaagtagcattcttttttttttattccttgcGAGGTAGGAATTTTGTCCTTGTATTCACCAGCATGATCCTCGTGAAAGATCTGGGTTTATCATATCACAGGGCTTCCGTTGTCTCTGAAATGTGCATGATAGTGTAGTGCAATGCCCACAAGGTATTTAGATGAGATgataaagtgttattttatcaAGACGTCTTGCCAGCTTTTGCTCAAAAGCTGTCTCAAGGCTGAAATTAGCGAAATGCTGCTTCTCTTATTTCTAGGTCATGCTTTTTCAAACTGAGTTTCAGTGGCAGTTGTGAATCAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU104934 lncRNA downstream 2556 16610270 ~ 16610561 (-) True G70955
TU104861 lncRNA downstream 492798 16118282 ~ 16120319 (-) True G70894
XR_006251840.1 lncRNA downstream 659141 15948113 ~ 15953976 (-) True LOC122352066
TU104518 lncRNA downstream 850448 15762383 ~ 15762669 (-) True G70660
TU104479 lncRNA downstream 968841 15642259 ~ 15644276 (-) True G70633
TU104958 lncRNA upstream 17062 16630486 ~ 16715102 (-) True G70967
TU104949 lncRNA upstream 99395 16712819 ~ 16713846 (-) False G70962
TU104950 lncRNA upstream 99395 16712819 ~ 16713846 (-) True G70962
TU104957 lncRNA upstream 102098 16715522 ~ 16717084 (-) True G70966
TU104956 lncRNA upstream 106091 16719515 ~ 16720573 (-) True G70965
XM_043248778.1 mRNA downstream 29056 16579731 ~ 16584061 (-) True dipk2b
XM_043248169.1 mRNA downstream 72466 16538368 ~ 16540651 (-) True fundc1
XM_043248411.1 mRNA downstream 75042 16526525 ~ 16538075 (-) True efhc2
XM_043248026.1 mRNA downstream 97673 16509560 ~ 16515444 (-) True LOC122351145
XM_043249228.1 mRNA downstream 108217 16477543 ~ 16504900 (-) False mao
XM_043248032.1 mRNA upstream 81330 16694754 ~ 16698639 (-) False slc35a5
XM_043248031.1 mRNA upstream 81330 16694754 ~ 16698537 (-) True slc35a5
XM_043249387.1 mRNA upstream 107380 16720804 ~ 16744816 (-) False dcaf6
XM_043249386.1 mRNA upstream 107380 16720804 ~ 16744816 (-) False dcaf6
XM_043249385.1 mRNA upstream 107380 16720804 ~ 16744816 (-) False dcaf6
TU104521 other downstream 841253 15771421 ~ 15771864 (-) True G70663
XR_006251733.1 other downstream 1213680 15389849 ~ 15399437 (-) False tmtc4
TU104362 other downstream 1307142 15303103 ~ 15305975 (-) True G70549
TU104031 other downstream 2359341 14196479 ~ 14253776 (-) True G70317
TU103993 other downstream 2673249 13938259 ~ 13939868 (-) True G70294
TU104983 other upstream 203716 16817140 ~ 16823694 (-) False G70986
TU104984 other upstream 203716 16817140 ~ 16823775 (-) True G70986
TU105258 other upstream 622448 17235872 ~ 17255491 (-) True G71118
XR_006251863.1 other upstream 1956331 18569755 ~ 18569882 (-) True LOC122352185
TU106113 other upstream 3107074 19720498 ~ 19721737 (-) False ankar

Expression Profile