RNA id: TU104949



Basic Information


Item Value
RNA id TU104949
length 747
lncRNA type inter_gene
GC content 0.39
exon number 4
gene id G70962
representative False

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 16712819 ~ 16713846 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


attgaattaaagcatttatatgcagtttttaaaaattctgcatttatttaatatatttaattacagcacattaaaaatggattaaattcatATTGTCATATGAAAGCACAGTGTTTATTCAAAATCACAACCAAGCAGCTCAATCCTCATAGTGATGGACTTCTGCCATTGTTTTGGAATAATCCGGATGAATTTGGAAAATATTGGGGGGTAGATGTAGTTCTTTACTTGGCCATTGTTATCTGCGTTGCCTTGAAATGTCCTTTTGttcataatcatcatcatctgtgtACTTTGTCCATCTCGTGCCATCTTCGCTGTACTCCAGAGAATACGATGTCACAAACATTTCATTGCCCAATGATTTGGCCCCCTGTGTTATAATTCCAGTTATCTTCTTTATATCCTTGAGTTCCACCTGGATCCATGGCTGAAGGTCATTGTTCTGGCTTGCCATGCATTGACGGTCCCATATTTATTTAAGCGTGCATACCAAGGATGCCACTGGCCGGAGTACCAACTGGAGGCCACAGAACTGGCAGTGATTTGAGCATCTTTAATGAGGCCACTTTCCATTCCCAATGGCACAGAGCAACCTGCATCAAGCTCACAACCATAGTACTCCAAACGGACTGTTGGGTAGTTGTAAGAATGTAAAGGATAAAGCCTCACATATCGACCAATCAGaggtgggaaaaaaatattctccTTCATGTCATAAGCTTCGCTGTTTCCTTCAAAAGTCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006251709.1 lncRNA downstream 81399 16605367 ~ 16631420 (-) False LOC122351188
XR_006251710.1 lncRNA downstream 95795 16605367 ~ 16617024 (-) True LOC122351188
TU104935 lncRNA downstream 99395 16613117 ~ 16613424 (-) True G70956
TU104934 lncRNA downstream 102258 16610270 ~ 16610561 (-) True G70955
TU104861 lncRNA downstream 592500 16118282 ~ 16120319 (-) True G70894
TU104957 lncRNA upstream 1676 16715522 ~ 16717084 (-) True G70966
TU104956 lncRNA upstream 5669 16719515 ~ 16720573 (-) True G70965
TU104942 lncRNA upstream 13301 16727147 ~ 16746222 (-) False dcaf6
TU104973 lncRNA upstream 37189 16751035 ~ 16751938 (-) True G70979
TU104994 lncRNA upstream 113212 16827058 ~ 16829659 (-) True G70991
XM_043248032.1 mRNA downstream 14180 16694754 ~ 16698639 (-) False slc35a5
XM_043248031.1 mRNA downstream 14282 16694754 ~ 16698537 (-) True slc35a5
XM_043248778.1 mRNA downstream 128758 16579731 ~ 16584061 (-) True dipk2b
XM_043248169.1 mRNA downstream 172168 16538368 ~ 16540651 (-) True fundc1
XM_043248411.1 mRNA downstream 174744 16526525 ~ 16538075 (-) True efhc2
XM_043249387.1 mRNA upstream 6958 16720804 ~ 16744816 (-) False dcaf6
XM_043249386.1 mRNA upstream 6958 16720804 ~ 16744816 (-) False dcaf6
XM_043249385.1 mRNA upstream 6958 16720804 ~ 16744816 (-) False dcaf6
XM_043249383.1 mRNA upstream 6958 16720804 ~ 16744816 (-) False dcaf6
XM_043249382.1 mRNA upstream 6958 16720804 ~ 16744816 (-) True dcaf6
TU104521 other downstream 940955 15771421 ~ 15771864 (-) True G70663
XR_006251733.1 other downstream 1313382 15389849 ~ 15399437 (-) False tmtc4
TU104362 other downstream 1406844 15303103 ~ 15305975 (-) True G70549
TU104031 other downstream 2459043 14196479 ~ 14253776 (-) True G70317
TU103993 other downstream 2772951 13938259 ~ 13939868 (-) True G70294
TU104983 other upstream 103294 16817140 ~ 16823694 (-) False G70986
TU104984 other upstream 103294 16817140 ~ 16823775 (-) True G70986
TU105258 other upstream 522026 17235872 ~ 17255491 (-) True G71118
XR_006251863.1 other upstream 1855909 18569755 ~ 18569882 (-) True LOC122352185
TU106113 other upstream 3006652 19720498 ~ 19721737 (-) False ankar

Expression Profile