RNA id: TU104984



Basic Information


Item Value
RNA id TU104984
length 424
RNA type TUCP
GC content 0.53
exon number 4
gene id G70986
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 16817140 ~ 16823775 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CATGCTGATGCTGTGAGTGAGTGCATCGGTGAGCCTCTGTATTGTGTTTTGAGGATTTGGgcttaaatattcaaaatggcGGACGGAGGAGCAGCGAGTCAAGATGAGAGTTCAGGACCAGATTCTAGAATGAGTAATCCATCGGAAACAAGTAAATGTGCAATGGAGAGCGGGGACGAAAACACTGGTGCCCAAACAAATGGACTGGACTTTCAGAGGCAGACTGTGCAAACAACAAGCGCAATCACCAATGCACACGCACAGGCCTTGCTCCAACAGTTGACTTTGACTCCAGCGCAGCAGCAGTTATTGCTGCAGCAGGCTCAGGCTCAGCTCTTAGCAGCAGCGGTGCAGCATTCAGCCGGCCAGCAGAGCAGCACTACAGGAGCCAGCATCTCTGCCTCCGCTGCCACCCCATCACCCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU104973 lncRNA downstream 65202 16751035 ~ 16751938 (-) True G70979
TU104942 lncRNA downstream 70918 16727147 ~ 16746222 (-) False dcaf6
TU104956 lncRNA downstream 96567 16719515 ~ 16720573 (-) True G70965
TU104957 lncRNA downstream 100056 16715522 ~ 16717084 (-) True G70966
TU104950 lncRNA downstream 103294 16712819 ~ 16713846 (-) True G70962
TU104994 lncRNA upstream 3283 16827058 ~ 16829659 (-) True G70991
TU105027 lncRNA upstream 41503 16865278 ~ 16865589 (-) True G71005
TU105028 lncRNA upstream 42403 16866178 ~ 16866422 (-) True G71006
TU104975 lncRNA upstream 42717 16866492 ~ 16867522 (-) True G70981
TU105039 lncRNA upstream 63030 16886805 ~ 16889429 (-) False cd247l
XM_043249605.1 mRNA downstream 49955 16761873 ~ 16767185 (-) True LOC122352097
XM_043248104.1 mRNA downstream 56968 16752003 ~ 16760172 (-) False LOC122351201
XM_043248105.1 mRNA downstream 56968 16752003 ~ 16760172 (-) True LOC122351201
XM_043249382.1 mRNA downstream 72324 16720804 ~ 16744816 (-) True dcaf6
XM_043248994.1 mRNA upstream 62978 16886753 ~ 16889547 (-) True cd247l
XM_043249544.1 mRNA upstream 74888 16898663 ~ 16902174 (-) True grtp1b
XM_043248949.1 mRNA upstream 114509 16938284 ~ 16954349 (-) False ppp2r3b
XM_043248948.1 mRNA upstream 114509 16938284 ~ 16954349 (-) True ppp2r3b
XM_043248953.1 mRNA upstream 114509 16938284 ~ 16947137 (-) False ppp2r3b
TU104521 other downstream 1045276 15771421 ~ 15771864 (-) True G70663
XR_006251733.1 other downstream 1417703 15389849 ~ 15399437 (-) False tmtc4
TU104362 other downstream 1511165 15303103 ~ 15305975 (-) True G70549
TU104031 other downstream 2563364 14196479 ~ 14253776 (-) True G70317
TU103993 other downstream 2877272 13938259 ~ 13939868 (-) True G70294
TU105258 other upstream 412097 17235872 ~ 17255491 (-) True G71118
XR_006251863.1 other upstream 1745980 18569755 ~ 18569882 (-) True LOC122352185
TU106113 other upstream 2896723 19720498 ~ 19721737 (-) False ankar
TU106134 other upstream 2972482 19796257 ~ 19804599 (-) False glsb
XR_006251780.1 other upstream 3058049 19881824 ~ 19893315 (-) False mfsd6b

Expression Profile