RNA id: TU105039



Basic Information


Item Value
RNA id TU105039
length 317
lncRNA type sense_over
GC content 0.44
exon number 6
gene id cd247l
representative False

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 16886753 ~ 16889547 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TAACCCCAATGAGCCTGTATATACAGACTTGGATCTGCCTCAGATGAGTTCCGATTATCAGCAACTGGATAGACCGATAAGAAGACGAGAGCCAGAGACACATTATCAGGAATTGAGAGCACATACAAGCGATGAATACCAGGAAATAAGAACTAAACCTCGCAAAGGCAAGAACAAATCTAATGAGGGTCGAGCAGGGAGAAACAGGAATGCAGCCGAGGCTGTGGAGATGGAAACATTTCCCACTGATGCATTACACAATTAACACAGAGCACAAGCTCAGGAGCAACCTCTATATCTGTTAACAGATAAATTGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU104975 lncRNA downstream 19283 16866492 ~ 16867522 (-) True G70981
TU105028 lncRNA downstream 20383 16866178 ~ 16866422 (-) True G71006
TU105027 lncRNA downstream 21216 16865278 ~ 16865589 (-) True G71005
TU104994 lncRNA downstream 57146 16827058 ~ 16829659 (-) True G70991
TU104973 lncRNA downstream 134867 16751035 ~ 16751938 (-) True G70979
TU105081 lncRNA upstream 27795 16917224 ~ 16919314 (-) True G71035
TU105257 lncRNA upstream 323447 17212876 ~ 17297150 (-) True G71117
TU105275 lncRNA upstream 449691 17339120 ~ 17339530 (-) True G71131
TU105278 lncRNA upstream 451116 17340545 ~ 17340915 (-) True G71134
XR_006251856.1 lncRNA upstream 454287 17343716 ~ 17351712 (-) True LOC122352115
XM_043249605.1 mRNA downstream 119620 16761873 ~ 16767185 (-) True LOC122352097
XM_043248104.1 mRNA downstream 126633 16752003 ~ 16760172 (-) False LOC122351201
XM_043248105.1 mRNA downstream 126633 16752003 ~ 16760172 (-) True LOC122351201
XM_043249382.1 mRNA downstream 141989 16720804 ~ 16744816 (-) True dcaf6
XM_043249544.1 mRNA upstream 9234 16898663 ~ 16902174 (-) True grtp1b
XM_043248949.1 mRNA upstream 48855 16938284 ~ 16954349 (-) False ppp2r3b
XM_043248948.1 mRNA upstream 48855 16938284 ~ 16954349 (-) True ppp2r3b
XM_043248953.1 mRNA upstream 48855 16938284 ~ 16947137 (-) False ppp2r3b
XM_043248952.1 mRNA upstream 49571 16939000 ~ 16954349 (-) False ppp2r3b
TU104984 other downstream 63030 16817140 ~ 16823775 (-) True G70986
TU104983 other downstream 63111 16817140 ~ 16823694 (-) False G70986
TU104521 other downstream 1114941 15771421 ~ 15771864 (-) True G70663
XR_006251733.1 other downstream 1487368 15389849 ~ 15399437 (-) False tmtc4
TU104362 other downstream 1580830 15303103 ~ 15305975 (-) True G70549
TU105258 other upstream 346443 17235872 ~ 17255491 (-) True G71118
XR_006251863.1 other upstream 1680326 18569755 ~ 18569882 (-) True LOC122352185
TU106113 other upstream 2831069 19720498 ~ 19721737 (-) False ankar
TU106134 other upstream 2906828 19796257 ~ 19804599 (-) False glsb
XR_006251780.1 other upstream 2992395 19881824 ~ 19893315 (-) False mfsd6b

Expression Profile