RNA id: TU105194


Basic Information

Item Value
RNA id TU105194
length 298
lncRNA type inter_gene
GC content 0.42
exon number 2
gene id G71086
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 17284070 ~ 17287296 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

cgagagcacacaacgagattaaatgaaaataaaagggtttaattccaaaatggcaaaataaaggatatacagacaggcaggcaggtcgaacaggcaggcaggataaacacaggtaaagacattaggtaaggacctcgacgctcggacaaacagaactcaaaacacaggacttaaatacacagggtaattgacaagacacagctgatgacaataacataattaacacagagggaaggcagggcacagggagcacatggcatgaaacaaaaacataaacacagagtccagagatgtgaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU105113 lncRNA upstream 5649 17196404 ~ 17278421 (+) False G71061
TU105117 lncRNA upstream 5649 17196404 ~ 17278421 (+) False G71061
TU105119 lncRNA upstream 5649 17196404 ~ 17278421 (+) False G71061
TU105191 lncRNA upstream 75550 17206701 ~ 17208520 (+) False G71083
TU105140 lncRNA upstream 79747 17132471 ~ 17204323 (+) False G71061
XR_006251728.1 lncRNA downstream 4568 17291864 ~ 17292889 (+) True LOC122351293
TU105197 lncRNA downstream 20287 17307583 ~ 17309040 (+) True G71088
TU105201 lncRNA downstream 23689 17310985 ~ 17315810 (+) True G71089
TU105266 lncRNA downstream 36503 17323799 ~ 17324342 (+) True G71126
TU105276 lncRNA downstream 53046 17340342 ~ 17340569 (+) True G71132
XM_043249610.1 mRNA upstream 69602 17208982 ~ 17214468 (+) True LOC122352102
XM_043248308.1 mRNA upstream 75850 17203871 ~ 17208220 (+) True jam2b
XM_043249408.1 mRNA upstream 95982 17178483 ~ 17188088 (+) False tfdp1a
XM_043249409.1 mRNA upstream 95982 17178608 ~ 17188088 (+) True tfdp1a
XM_043249410.1 mRNA upstream 95982 17178608 ~ 17188088 (+) False tfdp1a
XM_043248254.1 mRNA downstream 647 17287943 ~ 17291835 (+) True LOC122351291
XM_043248531.1 mRNA downstream 5696 17292992 ~ 17299145 (+) True LOC122351452
XM_043249586.1 mRNA downstream 32634 17319930 ~ 17323175 (+) True si:dkey-192g7.3
XM_043248645.1 mRNA downstream 341022 17628318 ~ 17638227 (+) True sona
XM_043248854.1 mRNA downstream 351348 17638644 ~ 17647811 (+) False rcan1a
TU105185 other upstream 77565 17203797 ~ 17206505 (+) False jam2b
TU105078 other upstream 364780 16916761 ~ 16919290 (+) True si:ch211-218d20.15
TU104753 other upstream 534375 16745899 ~ 16749695 (+) False mpc2b
TU104743 other upstream 552709 16728507 ~ 16731361 (+) True G70814
TU104501 other upstream 1537964 15734592 ~ 15746106 (+) False plcl1
TU105274 other downstream 51831 17339127 ~ 17339622 (+) True G71130
XR_006251816.1 other downstream 448710 17736006 ~ 17949307 (+) False lrp1bb
XR_006251864.1 other downstream 1259864 18547160 ~ 18547282 (+) True LOC122352186
XR_006251866.1 other downstream 1261185 18548481 ~ 18548607 (+) True LOC122352188
TU105623 other downstream 1262982 18550278 ~ 18552882 (+) False clasp1a

Expression Profile