RNA id: TU105258



Basic Information


Item Value
RNA id TU105258
length 476
RNA type TUCP
GC content 0.47
exon number 2
gene id G71118
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 17235872 ~ 17255491 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCTGAAGAGAGTAATGGCATGAGCCTTGCGTCGagatcctgtcaaagcactatACAGAGAATTTCTCGCACCTGAACTTTGAGACCCTTTCCTGAGGActattttaccatttaaacGGGACGTGTTATTACCTTACATACTCTGACACGCAACAGCAGCACTTGAGAAGTCACTCCACCGGCAGTTGCGTTCCTGTCTtgagacatttaaaataaaaggataTGGTGTTGGACATGTGAAATACACGGGAAACTTCAAACATGAAGCTGGCATCTTCTCTGTGTTGCCTCGGCTTTCTTCTCACTTCTGTGGCTGTCCGTTTCAGCGACTCGCAGCAAGTATGCCCTGGCACAGAGAATAAACTGAGTACTCTGTCAGACCTGGACCAGCAGTATCGGACCCTTCGTAAATACTATGAGAACTGCGAGGTGGTGATGGGTAACCTGGAGATCACCAGCATCGATCGCAGTCGTGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU105081 lncRNA downstream 316558 16917224 ~ 16919314 (-) True G71035
TU105039 lncRNA downstream 346443 16886805 ~ 16889429 (-) False cd247l
TU104975 lncRNA downstream 368350 16866492 ~ 16867522 (-) True G70981
TU105028 lncRNA downstream 369450 16866178 ~ 16866422 (-) True G71006
TU105027 lncRNA downstream 370283 16865278 ~ 16865589 (-) True G71005
TU105275 lncRNA upstream 83629 17339120 ~ 17339530 (-) True G71131
TU105278 lncRNA upstream 85054 17340545 ~ 17340915 (-) True G71134
XR_006251856.1 lncRNA upstream 88225 17343716 ~ 17351712 (-) True LOC122352115
TU105286 lncRNA upstream 108696 17364187 ~ 17368255 (-) False ncam2
TU105295 lncRNA upstream 336473 17591964 ~ 17592183 (-) True G71149
XM_043248272.1 mRNA downstream 37481 17196411 ~ 17198391 (-) False si:ch211-160b11.4
XM_043248269.1 mRNA downstream 37482 17196411 ~ 17198390 (-) True si:ch211-160b11.4
XM_043248271.1 mRNA downstream 37540 17196411 ~ 17198332 (-) False si:ch211-160b11.4
XM_043248274.1 mRNA downstream 37552 17196411 ~ 17198320 (-) False si:ch211-160b11.4
XM_043248270.1 mRNA downstream 37566 17196411 ~ 17198306 (-) False si:ch211-160b11.4
XM_043248528.1 mRNA upstream 43754 17299245 ~ 17315818 (-) True appb
XM_043248530.1 mRNA upstream 43754 17299245 ~ 17315815 (-) False appb
XM_043248035.1 mRNA upstream 108702 17364193 ~ 17521559 (-) False ncam2
XM_043248033.1 mRNA upstream 108702 17364193 ~ 17521559 (-) True ncam2
XM_043248036.1 mRNA upstream 117670 17373161 ~ 17521560 (-) False ncam2
TU104984 other downstream 412097 16817140 ~ 16823775 (-) True G70986
TU104983 other downstream 412178 16817140 ~ 16823694 (-) False G70986
TU104521 other downstream 1464008 15771421 ~ 15771864 (-) True G70663
XR_006251733.1 other downstream 1836435 15389849 ~ 15399437 (-) False tmtc4
TU104362 other downstream 1929897 15303103 ~ 15305975 (-) True G70549
XR_006251863.1 other upstream 1314264 18569755 ~ 18569882 (-) True LOC122352185
TU106113 other upstream 2465007 19720498 ~ 19721737 (-) False ankar
TU106134 other upstream 2540766 19796257 ~ 19804599 (-) False glsb
XR_006251780.1 other upstream 2626333 19881824 ~ 19893315 (-) False mfsd6b
TU106614 other upstream 3233673 20489164 ~ 20503890 (-) False G71938

Expression Profile