RNA id: TU105352



Basic Information


Item Value
RNA id TU105352
length 230
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G71190
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 17661216 ~ 17661445 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CGCATTTCTGACACCAAACATTCTTAAACGCCTGAGAAATACCAGTCACACACAAGAGAAAGAGCCGCGGATGGTACGAAGCCAGGCCTTTTCAATGGATTTTCCAATTTCATTTGATGCatcgtttttattttgtgcgTAAGCCCGTGATTACAAATGGTTTTATCAGTCAAGCCTCTGTGCggtgttttatctgtttatgCCAGAAGGACACAGATGCTACCTTAGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU105330 lncRNA downstream 15296 17644438 ~ 17645920 (-) True G71175
TU105349 lncRNA downstream 17540 17643356 ~ 17643676 (-) True G71187
TU105348 lncRNA downstream 18778 17642203 ~ 17642438 (-) True G71186
TU105347 lncRNA downstream 19929 17641054 ~ 17641287 (-) True G71185
TU105346 lncRNA downstream 20813 17640179 ~ 17640403 (-) True G71184
TU105360 lncRNA upstream 4074 17665519 ~ 17692820 (-) True G71194
XR_006251849.1 lncRNA upstream 71758 17733203 ~ 17735919 (-) False LOC122352098
XR_006251848.1 lncRNA upstream 71758 17733203 ~ 17735919 (-) True LOC122352098
TU105518 lncRNA upstream 560869 18222314 ~ 18226787 (-) True G71293
TU105535 lncRNA upstream 589815 18251260 ~ 18366238 (-) False sema5ba
XM_043248852.1 mRNA downstream 9095 17649975 ~ 17652121 (-) True dnajc28
XM_043248995.1 mRNA downstream 86842 17559528 ~ 17574374 (-) True zp2l1
XM_043248036.1 mRNA downstream 139656 17373161 ~ 17521560 (-) False ncam2
XM_043248035.1 mRNA downstream 139657 17364193 ~ 17521559 (-) False ncam2
XM_043248033.1 mRNA downstream 139657 17364193 ~ 17521559 (-) True ncam2
XM_043249540.1 mRNA upstream 366909 18028354 ~ 18038668 (-) True ralba
XM_043249405.1 mRNA upstream 535681 18197126 ~ 18205461 (-) True hspbap1
XM_043248996.1 mRNA upstream 589791 18251236 ~ 18366267 (-) True sema5ba
XM_043249266.1 mRNA upstream 765627 18427072 ~ 18492873 (-) True adcy5
XM_043249267.1 mRNA upstream 765627 18427072 ~ 18492869 (-) False adcy5
TU105258 other downstream 405725 17235872 ~ 17255491 (-) True G71118
TU104984 other downstream 837441 16817140 ~ 16823775 (-) True G70986
TU104983 other downstream 837522 16817140 ~ 16823694 (-) False G70986
TU104521 other downstream 1889352 15771421 ~ 15771864 (-) True G70663
XR_006251733.1 other downstream 2261779 15389849 ~ 15399437 (-) False tmtc4
XR_006251863.1 other upstream 908310 18569755 ~ 18569882 (-) True LOC122352185
TU106113 other upstream 2059053 19720498 ~ 19721737 (-) False ankar
TU106134 other upstream 2134812 19796257 ~ 19804599 (-) False glsb
XR_006251780.1 other upstream 2220379 19881824 ~ 19893315 (-) False mfsd6b
TU106614 other upstream 2827719 20489164 ~ 20503890 (-) False G71938

Expression Profile