RNA id: TU105976



Basic Information


Item Value
RNA id TU105976
length 210
RNA type TUCP
GC content 0.48
exon number 1
gene id G71585
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 19621284 ~ 19621493 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CCTGGACAACAGAATCTGGGACAACCCGACTGAAATTTTCTCAGGGATCCAAGCTGCAAAATAGCTCTCATTAAGCACCGTTTGCAAGTTCTGGAGGGCAGTGACATACTCCGAGGCTGTTGTGTATAGGCTATTCCACTCTGCCATAAGGACTGAGGGTGTGACATTGTACAGTACAGCTCCATTCACAGCACTAACCAACTGATGGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU105968 lncRNA upstream 808 19615694 ~ 19620476 (+) True G71583
TU105963 lncRNA upstream 3156 19616541 ~ 19618128 (+) False G71583
TU105958 lncRNA upstream 14083 19606985 ~ 19607201 (+) True G71581
TU105930 lncRNA upstream 77607 19538425 ~ 19543677 (+) True vwc2l
TU105888 lncRNA upstream 365051 19256030 ~ 19256233 (+) True G71517
TU105977 lncRNA downstream 12959 19634452 ~ 19634847 (+) True G71586
TU106052 lncRNA downstream 130089 19751582 ~ 19752090 (+) True G71627
TU106053 lncRNA downstream 130815 19752308 ~ 19752693 (+) True G71628
TU106055 lncRNA downstream 131737 19753230 ~ 19753756 (+) True G71630
TU106054 lncRNA downstream 133031 19754524 ~ 19755093 (+) True G71629
XM_043248262.1 mRNA upstream 81592 19513873 ~ 19539692 (+) False vwc2l
XM_043248263.1 mRNA upstream 81592 19514570 ~ 19539692 (+) False vwc2l
XM_043248261.1 mRNA upstream 82822 19512854 ~ 19538462 (+) False vwc2l
XM_043248264.1 mRNA upstream 82823 19512854 ~ 19538461 (+) False vwc2l
XM_043248265.1 mRNA upstream 82832 19512854 ~ 19538452 (+) False vwc2l
XM_043248252.1 mRNA downstream 21556 19643049 ~ 19666613 (+) True hibch
XM_043248251.1 mRNA downstream 51767 19673260 ~ 19676836 (+) True mstnb
XM_043249433.1 mRNA downstream 87871 19709364 ~ 19714404 (+) True ormdl1
XM_043248066.1 mRNA downstream 95769 19717262 ~ 19720435 (+) True osgepl1
XM_043248067.1 mRNA downstream 95939 19717432 ~ 19720435 (+) False osgepl1
TU105807 other upstream 700869 18917570 ~ 18920415 (+) False cps1
TU105802 other upstream 714237 18901629 ~ 18907047 (+) False cps1
XR_006251718.1 other upstream 933042 18682672 ~ 18688242 (+) False lmln
XR_006251717.1 other upstream 933061 18682672 ~ 18688223 (+) False lmln
XR_006251742.1 other upstream 980104 18635106 ~ 18641180 (+) False plcd4b
TU106041 other downstream 87892 19709385 ~ 19714402 (+) False ormdl1
TU106423 other downstream 803508 20425001 ~ 20750851 (+) True G71825
TU106440 other downstream 815665 20437158 ~ 20764175 (+) True G71835
TU106451 other downstream 938149 20559642 ~ 20569276 (+) True G71842
XR_006251766.1 other downstream 1358943 20980436 ~ 21050572 (+) False LOC122351557

Expression Profile