RNA id: TU106074


Basic Information

Item Value
RNA id TU106074
length 989
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G71645
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 19709384 ~ 19712184 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

aAATGATTGGTGAGATTGTAAAGAATTTTCTAGATGACGTGAACTGTACGCCGTAGTCCAGCTGTTCCCAGTGTGTGAGAAGTCTTGCCTTGCCCTGGTCTGGTGTTTCAAATGGCGTGCCTTTCActgcatgcataaatacatacatacccTGCGGGAAGATAGAGAGAAGATCCAATGTCACACCATTCTCAAATGTTGTACCAATGGGACCTCTTGGTatgaaagggatagttcaccaaaaaaatctgtcatttacttAGACTCAAGTCactccaaacctgcatgacttacGTTGATCTCCACAACACATATTCAAGTATTTTTGAATAAGCTATTGTATAACTTgaaaaaaacttgaaatgaaaatgtctgaTCGTTCCTCCCTCACATCACTGCAGACTTACTACGCTAAACTTTTCATTACCGCCAGGACAACGGAAACATTACATTATCCCTATAAATAGCTTTGCTTTATCATTTTGGCGCGAACCGTCCTACGTCATCACATGCGAGAGAGCTTGCACTTGGTTGGTGATGTCGCGCCGTTGACCTTGAATCCTTGCGCGAGGGAGTCCTTACATAACAACGCCACACAGACTTCTAAGGAAGCATCAATTGTCGAGACTCCAACTGGCCTCAGGGCAACGCTGAGGAAATGACAAGCCATAGACAAGGGAATAAAACGGGCCAGAACGAAGGATTGTTATTCAACAGAGGACACTTACAAAATTGTGAATAACATTTGTGAGGGTCCACACAACAGGAACACTGAAGAAAGGAATGCTCAACAGTACGATGTGAAGCATTCCTACGCCGAGCGCGTATGTCAGCCATATCCCTCGACTGTTCATCACACGGGTGTTTGGGTTTACTTCACTGTGGGCCACACCGACGTTCATCTTGCTTTtTTGTTTGCGTTCGGGTGAAGCAGGCTGGAGCGCTGCCGGCCTCCGCTGCGCGCACTGCGGGCTGACTCACTGCAAACA

Function

GO:

id name namespace
GO:0004064 arylesterase activity molecular_function

KEGG:

id description
ko00830 Retinol metabolism
ko00980 Metabolism of xenobiotics by cytochrome P450
ko05204 Chemical carcinogenesis - DNA adducts

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006251727.1 lncRNA downstream 27985 19674731 ~ 19681399 (-) True LOC122351289
TU106096 lncRNA downstream 38220 19667000 ~ 19671164 (-) True G71667
TU105981 lncRNA downstream 165537 19458787 ~ 19543847 (-) False G71587
TU106115 lncRNA upstream 18552 19730736 ~ 19731239 (-) False ankar
TU106128 lncRNA upstream 79063 19791247 ~ 19791560 (-) True G71692
TU106135 lncRNA upstream 87428 19799612 ~ 19807087 (-) True glsb
TU106137 lncRNA upstream 87428 19799612 ~ 19804599 (-) False glsb
TU106132 lncRNA upstream 88223 19800407 ~ 19807087 (-) False glsb
XM_043249043.1 mRNA downstream 414 19684890 ~ 19708970 (-) False pms1
XM_043249042.1 mRNA downstream 414 19684890 ~ 19708970 (-) True pms1
XM_043249044.1 mRNA downstream 414 19687834 ~ 19708970 (-) False pms1
XM_043249045.1 mRNA downstream 414 19687837 ~ 19708970 (-) False pms1
XM_043248250.1 mRNA downstream 66451 19636451 ~ 19642933 (-) True pofut2
XM_043249432.1 mRNA upstream 1301 19713485 ~ 19716443 (-) True adat3
XM_043248068.1 mRNA upstream 7758 19719942 ~ 19731794 (-) True ankar
XM_043249547.1 mRNA upstream 21716 19733900 ~ 19736121 (-) True asnsd1
XM_043249549.1 mRNA upstream 23849 19736033 ~ 19737211 (-) True LOC122352057
XM_043249391.1 mRNA upstream 38358 19750542 ~ 19766793 (-) True wdr75
XR_006251863.1 other downstream 1139502 18569755 ~ 18569882 (-) True LOC122352185
TU105258 other downstream 2453893 17235872 ~ 17255491 (-) True G71118
TU104984 other downstream 2885609 16817140 ~ 16823775 (-) True G70986
TU104983 other downstream 2885690 16817140 ~ 16823694 (-) False G70986
TU104521 other downstream 3937520 15771421 ~ 15771864 (-) True G70663
TU106113 other upstream 8314 19720498 ~ 19721737 (-) False ankar
TU106134 other upstream 84073 19796257 ~ 19804599 (-) False glsb
XR_006251780.1 other upstream 169640 19881824 ~ 19893315 (-) False mfsd6b
TU106614 other upstream 776980 20489164 ~ 20503890 (-) False G71938
TU106615 other upstream 776980 20489164 ~ 20503890 (-) True G71938

Expression Profile