RNA id: TU106128


Basic Information

Item Value
RNA id TU106128
length 294
lncRNA type inter_gene
GC content 0.32
exon number 2
gene id G71692
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 19791247 ~ 19791560 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TAGATGGACATTGTGTACCTGTAGGTTGTATGCGCTTGGTTTCGAAGTGCTTGCAGCAAATGACAGTCATGATATGTATGCTTAAAATACTACCATACTTCTTCTACAAGCACGGACACAAAATAAATCCATTGAAGCATTAGTTAGCacagcaattattttaaaaagaaatacaggaCAGCTTTATGTCTCCATGActttaaactaataaattaatagagTAAATTAGTAGCATTTAAGACAgaagaactgaaaaaaagtatttgttttcattgtaataTCAACCGATTTGCA

Function

GO:

id name namespace
GO:0004197 cysteine-type endopeptidase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU106115 lncRNA downstream 60008 19730736 ~ 19731239 (-) False ankar
TU106074 lncRNA downstream 79063 19709384 ~ 19712184 (-) True G71645
XR_006251727.1 lncRNA downstream 109848 19674731 ~ 19681399 (-) True LOC122351289
TU106096 lncRNA downstream 120083 19667000 ~ 19671164 (-) True G71667
TU105978 lncRNA downstream 247400 19537741 ~ 19543847 (-) True G71587
TU106135 lncRNA upstream 8052 19799612 ~ 19807087 (-) True glsb
TU106137 lncRNA upstream 8052 19799612 ~ 19804599 (-) False glsb
TU106132 lncRNA upstream 8847 19800407 ~ 19807087 (-) False glsb
TU106138 lncRNA upstream 16306 19807866 ~ 19810123 (-) False glsb
TU106145 lncRNA upstream 56779 19848339 ~ 19852587 (-) False nab1b
XM_043249391.1 mRNA downstream 24454 19750542 ~ 19766793 (-) True wdr75
XM_043249392.1 mRNA downstream 24460 19750542 ~ 19766787 (-) False wdr75
XM_043249549.1 mRNA downstream 54036 19736033 ~ 19737211 (-) True LOC122352057
XM_043249547.1 mRNA downstream 55126 19733900 ~ 19736121 (-) True asnsd1
XM_043248068.1 mRNA downstream 59453 19719942 ~ 19731794 (-) True ankar
XM_043248998.1 mRNA upstream 4692 19796252 ~ 19829475 (-) False glsb
XM_043248999.1 mRNA upstream 42360 19833920 ~ 19852625 (-) True nab1b
XM_043248788.1 mRNA upstream 89990 19881550 ~ 19893314 (-) False mfsd6b
XM_043248790.1 mRNA upstream 90254 19881814 ~ 19893315 (-) True mfsd6b
XM_043248791.1 mRNA upstream 90263 19881823 ~ 19893314 (-) False mfsd6b
TU106113 other downstream 69510 19720498 ~ 19721737 (-) False ankar
XR_006251863.1 other downstream 1221365 18569755 ~ 18569882 (-) True LOC122352185
TU105258 other downstream 2535756 17235872 ~ 17255491 (-) True G71118
TU104984 other downstream 2967472 16817140 ~ 16823775 (-) True G70986
TU104983 other downstream 2967553 16817140 ~ 16823694 (-) False G70986
TU106134 other upstream 4697 19796257 ~ 19804599 (-) False glsb
XR_006251780.1 other upstream 90264 19881824 ~ 19893315 (-) False mfsd6b
TU106614 other upstream 697604 20489164 ~ 20503890 (-) False G71938
TU106615 other upstream 697604 20489164 ~ 20503890 (-) True G71938
TU107092 other upstream 1917728 21709288 ~ 21726820 (-) True G72363

Expression Profile