RNA id: TU106145



Basic Information


Item Value
RNA id TU106145
length 308
lncRNA type sense_over
GC content 0.51
exon number 2
gene id nab1b
representative False

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 19833920 ~ 19852625 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCAGTAGGGGAGAGAGCGGAAACCAACTAGTTAGAGTGTCCCTCCGTAGTTCAAACTACAGAGTGCGTGAGAGTTAATTCAAAAGAGAGAGCCGAAGGAGCGTCGCTTACCCGCCGAACGCGCGGCACCTCGCTGGACGTCAGGTGAAGCGTCGCGTAAATCAACGGAGCGTCACATTTCAGAACTTTAACAATCAAACAAGCAGACGGCGCTTTTGGAAGAGTTTTGGTgggaaaagacaaagaaagaaaaccaaaagGTATGGCAGCGACTTTACCCAGAACCCTTGGGAGTTGCAGCTCTACCGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU106138 lncRNA downstream 38216 19807866 ~ 19810123 (-) False glsb
TU106135 lncRNA downstream 41252 19799612 ~ 19807087 (-) True glsb
TU106132 lncRNA downstream 41252 19800407 ~ 19807087 (-) False glsb
TU106137 lncRNA downstream 43740 19799612 ~ 19804599 (-) False glsb
TU106128 lncRNA downstream 56779 19791247 ~ 19791560 (-) True G71692
TU106184 lncRNA upstream 34588 19887175 ~ 19941547 (-) True G71727
TU106191 lncRNA upstream 63612 19916199 ~ 19922691 (-) True G71732
TU106551 lncRNA upstream 310536 20163123 ~ 20168604 (-) True G71912
TU106568 lncRNA upstream 362833 20215420 ~ 20218047 (-) True G71919
TU106549 lncRNA upstream 418471 20271058 ~ 20602822 (-) False G71912
XM_043248998.1 mRNA downstream 18864 19796252 ~ 19829475 (-) False glsb
XM_043249391.1 mRNA downstream 81546 19750542 ~ 19766793 (-) True wdr75
XM_043249392.1 mRNA downstream 81552 19750542 ~ 19766787 (-) False wdr75
XM_043249549.1 mRNA downstream 111128 19736033 ~ 19737211 (-) True LOC122352057
XM_043249547.1 mRNA downstream 112218 19733900 ~ 19736121 (-) True asnsd1
XM_043248788.1 mRNA upstream 28963 19881550 ~ 19893314 (-) False mfsd6b
XM_043248790.1 mRNA upstream 29227 19881814 ~ 19893315 (-) True mfsd6b
XM_043248791.1 mRNA upstream 29236 19881823 ~ 19893314 (-) False mfsd6b
XM_043248317.1 mRNA upstream 144888 19997475 ~ 20029805 (-) False obsl1b
XM_043248319.1 mRNA upstream 144888 19997475 ~ 20029805 (-) False obsl1b
TU106134 other downstream 43740 19796257 ~ 19804599 (-) False glsb
TU106113 other downstream 126602 19720498 ~ 19721737 (-) False ankar
XR_006251863.1 other downstream 1278457 18569755 ~ 18569882 (-) True LOC122352185
TU105258 other downstream 2592848 17235872 ~ 17255491 (-) True G71118
TU104984 other downstream 3024564 16817140 ~ 16823775 (-) True G70986
XR_006251780.1 other upstream 29237 19881824 ~ 19893315 (-) False mfsd6b
TU106614 other upstream 636577 20489164 ~ 20503890 (-) False G71938
TU106615 other upstream 636577 20489164 ~ 20503890 (-) True G71938
TU107092 other upstream 1856701 21709288 ~ 21726820 (-) True G72363
XR_006251764.1 other upstream 2318876 22171463 ~ 22223667 (-) False cerkl

Expression Profile