RNA id: TU106577



Basic Information


Item Value
RNA id TU106577
length 254
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G71924
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 20378652 ~ 20389699 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CAGAGAGTGGGGCTGGGTCTGATTGCTGCTCTGAGCAGGAAAAACCTCAGTCTGTCTTCATGGTGAAGCGATAACCTGGActcttttttcccttctcttcCCGGTTACTTTGCCCGCAAGAACAGCTCATGTCTTTGATATGGGCATAATGATATTTCAGCCTTATAGGACTGTCCTGTTTCTGGCTTTATCTGTGgcttttttacagtttgtgaAATGCCAAGACGAAAGTGATGATGAGCTGAGCTGTACAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU106560 lncRNA downstream 76216 20297199 ~ 20302436 (-) False LOC122351563
XR_006251770.1 lncRNA downstream 76224 20296930 ~ 20302428 (-) True LOC122351563
TU106568 lncRNA downstream 160605 20215420 ~ 20218047 (-) True G71919
TU106551 lncRNA downstream 210048 20163123 ~ 20168604 (-) True G71912
TU106184 lncRNA downstream 437105 19887175 ~ 19941547 (-) True G71727
XR_006251769.1 lncRNA upstream 44417 20434116 ~ 20434969 (-) True LOC122351562
TU106617 lncRNA upstream 114569 20504268 ~ 20508659 (-) True G71940
TU106618 lncRNA upstream 114627 20504326 ~ 20508702 (-) False G71940
XR_006251768.1 lncRNA upstream 212285 20601984 ~ 20602557 (-) True LOC122351561
TU106557 lncRNA upstream 223190 20612889 ~ 20630423 (-) False G71912
XM_043248701.1 mRNA downstream 83274 20271220 ~ 20295378 (-) False tfpia
XM_043248699.1 mRNA downstream 83274 20271220 ~ 20295378 (-) True tfpia
XM_043248702.1 mRNA downstream 83274 20272793 ~ 20295378 (-) False tfpia
XM_043248700.1 mRNA downstream 83276 20271220 ~ 20295376 (-) False tfpia
XM_043249235.1 mRNA downstream 108120 20248988 ~ 20270532 (-) True calcrla
XM_043248706.1 mRNA upstream 11685 20401384 ~ 20403699 (-) True LOC122351553
XM_043249002.1 mRNA upstream 21696 20411395 ~ 20417109 (-) True LOC122351723
XM_043249003.1 mRNA upstream 28173 20417872 ~ 20421682 (-) True LOC122351724
XM_043248703.1 mRNA upstream 31983 20421682 ~ 20423199 (-) True LOC122351551
XM_043249004.1 mRNA upstream 33214 20422913 ~ 20426727 (-) True LOC122351725
XR_006251780.1 other downstream 485337 19881824 ~ 19893315 (-) False mfsd6b
TU106134 other downstream 574053 19796257 ~ 19804599 (-) False glsb
TU106113 other downstream 656915 19720498 ~ 19721737 (-) False ankar
XR_006251863.1 other downstream 1808770 18569755 ~ 18569882 (-) True LOC122352185
TU105258 other downstream 3123161 17235872 ~ 17255491 (-) True G71118
TU106614 other upstream 99465 20489164 ~ 20503890 (-) False G71938
TU106615 other upstream 99465 20489164 ~ 20503890 (-) True G71938
TU107092 other upstream 1319589 21709288 ~ 21726820 (-) True G72363
XR_006251764.1 other upstream 1781764 22171463 ~ 22223667 (-) False cerkl
TU107316 other upstream 1909473 22299172 ~ 22307013 (-) False LOC122351746