RNA id: TU106635



Basic Information


Item Value
RNA id TU106635
length 488
lncRNA type inter_gene
GC content 0.42
exon number 2
gene id G71957
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 20757618 ~ 20758206 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TTCAAGTGTAATTGGAACATCATTTAAGGTACCCAATCTGATCAAGGGAATTCAATATCAGTTCAGAGTCTGTGCAGAGAATAGATATGGTGCAAGTGAACCTTTAGTTTCACAAAATGTCATTGCCAAGCATGAGTTCAGACCACCTGGCCCACCAGGCATGCCAGTagtttacaatgttacaaatgatGGTATGACTATTCAGTGGGAAAAACCTATTTTTGATGGAGGTTGTCCAGTCCTTGGGTTCCATGTTGAAAAGAAGGAGAAGAACAGCATAATGTGGCAAAGGTTAACATTGTCTTGGTCAAAGAAATGGACTACAGGATTCTTGGTCTTATTGAAGGCTTGGAATATCAGTTCAGAGTCTATGCCCAGAATGATGCTGGATATAGTCGCATGAGTGATGCAAGCAAACCTGTTATGGCAGTTTCTCCAGTTGatccTCCTGGTACCCCCTGACTATGTTGGCGTAACAAGTGAATCAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006251771.1 lncRNA downstream 120196 20632693 ~ 20637422 (-) True LOC122351564
TU106557 lncRNA downstream 127195 20612889 ~ 20630423 (-) False G71912
XR_006251768.1 lncRNA downstream 155061 20601984 ~ 20602557 (-) True LOC122351561
TU106618 lncRNA downstream 248916 20504326 ~ 20508702 (-) False G71940
TU106617 lncRNA downstream 248959 20504268 ~ 20508659 (-) True G71940
TU106663 lncRNA upstream 434859 21193065 ~ 21193278 (-) True G71981
TU106668 lncRNA upstream 448009 21206215 ~ 21206762 (-) True G71984
XR_006251774.1 lncRNA upstream 474980 21233186 ~ 21245762 (-) True LOC122351567
TU106671 lncRNA upstream 476373 21234579 ~ 21245785 (-) False LOC122351567
TU106713 lncRNA upstream 670922 21429128 ~ 21430341 (-) True G72024
XM_043249009.1 mRNA downstream 505 20755896 ~ 20757113 (-) True LOC122351732
XM_043248709.1 mRNA downstream 4638 20751269 ~ 20752980 (-) True LOC122351558
XM_043249008.1 mRNA downstream 6356 20750652 ~ 20751262 (-) True LOC122351731
XM_043249007.1 mRNA downstream 7005 20747875 ~ 20750613 (-) True LOC122351730
XM_043248669.1 mRNA downstream 10748 20737023 ~ 20746870 (-) True LOC122351538
XM_043249010.1 mRNA upstream 1840 20760046 ~ 20761027 (-) True LOC122351733
XM_043249011.1 mRNA upstream 11539 20769745 ~ 20771153 (-) True LOC122351738
XM_043249014.1 mRNA upstream 410733 21168939 ~ 21170775 (-) True LOC122351741
XM_043248710.1 mRNA upstream 985837 21744043 ~ 21896047 (-) True LOC122351560
XM_043249016.1 mRNA upstream 1138979 21897185 ~ 21907713 (-) True LOC122351744
TU106614 other downstream 253728 20489164 ~ 20503890 (-) False G71938
TU106615 other downstream 253728 20489164 ~ 20503890 (-) True G71938
XR_006251780.1 other downstream 864303 19881824 ~ 19893315 (-) False mfsd6b
TU106134 other downstream 953019 19796257 ~ 19804599 (-) False glsb
TU106113 other downstream 1035881 19720498 ~ 19721737 (-) False ankar
TU107092 other upstream 951082 21709288 ~ 21726820 (-) True G72363
XR_006251764.1 other upstream 1413257 22171463 ~ 22223667 (-) False cerkl
TU107316 other upstream 1540966 22299172 ~ 22307013 (-) False LOC122351746
TU107329 other upstream 1701190 22459396 ~ 22511307 (-) False LOC122351746
TU107929 other upstream 3172001 23930207 ~ 23931329 (-) True G72930

Expression Profile