RNA id: TU106716



Basic Information


Item Value
RNA id TU106716
length 505
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G72026
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 21433857 ~ 21436278 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AGCAAGGAGCTGCTCATGTTCCTCTAGAAGCTTTTTGTTCTCATCCTGGTTGTTTCCGATCTCCAGAAGGTTGGGTTGTGCTTCTGTCAGTTGTAGATGCACCAGCTCACCacactttaaaacacacacacacacaCCTTGAGTACTGCTACAACAATCTGGGCAGTTCCAGCCTGTACAGCCACAGTGCTGATAGTTGTTGTGGAAGGCTGACCTCCAGCATTACCTTCACTGGACATTGTGGAGACTGTTCCCTCGAGTCCACACATCCAAGAACCTGAAAGGTCAGAACAAAGCTCGGTACACACAGGTTTGTGCTGTAATCCAAATCTCCCCTTTTTCCAAAGTCCACAACTGTCTCGACAGGCGCCTAAACCCAAACAGAGTGAAGTCTCTGGGGTTTTTAAAGTGACATGGCCCACGTCCACATCAAAGCTCCACTTGCCCTGCAGGTAAACTCTACAACCCCTTAAAGGTCTTTCAGCATTGCTGGGCTCTGGCAGGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU106713 lncRNA downstream 3516 21429128 ~ 21430341 (-) True G72024
TU106671 lncRNA downstream 188072 21234579 ~ 21245785 (-) False LOC122351567
XR_006251774.1 lncRNA downstream 188095 21233186 ~ 21245762 (-) True LOC122351567
TU106668 lncRNA downstream 227095 21206215 ~ 21206762 (-) True G71984
TU106663 lncRNA downstream 240579 21193065 ~ 21193278 (-) True G71981
TU106978 lncRNA upstream 171516 21607794 ~ 21615684 (-) True G72260
TU106979 lncRNA upstream 171516 21607794 ~ 21615684 (-) False G72260
TU106983 lncRNA upstream 171516 21607794 ~ 21615684 (-) False G72260
TU106984 lncRNA upstream 171516 21607794 ~ 21615684 (-) False G72260
TU107104 lncRNA upstream 296030 21732308 ~ 21732996 (-) True G72372
XM_043249014.1 mRNA downstream 263082 21168939 ~ 21170775 (-) True LOC122351741
XM_043249011.1 mRNA downstream 662704 20769745 ~ 20771153 (-) True LOC122351738
XM_043249010.1 mRNA downstream 672830 20760046 ~ 20761027 (-) True LOC122351733
XM_043249009.1 mRNA downstream 676744 20755896 ~ 20757113 (-) True LOC122351732
XM_043248709.1 mRNA downstream 680877 20751269 ~ 20752980 (-) True LOC122351558
XM_043248710.1 mRNA upstream 307765 21744043 ~ 21896047 (-) True LOC122351560
XM_043249016.1 mRNA upstream 460907 21897185 ~ 21907713 (-) True LOC122351744
XM_043248643.1 mRNA upstream 735185 22171463 ~ 22223666 (-) True cerkl
XM_043248644.1 mRNA upstream 789280 22225558 ~ 22228499 (-) True neurod1
XM_043249520.1 mRNA upstream 905130 22341408 ~ 22398653 (-) True LOC122352034
TU106614 other downstream 929967 20489164 ~ 20503890 (-) False G71938
TU106615 other downstream 929967 20489164 ~ 20503890 (-) True G71938
XR_006251780.1 other downstream 1540542 19881824 ~ 19893315 (-) False mfsd6b
TU106134 other downstream 1629258 19796257 ~ 19804599 (-) False glsb
TU106113 other downstream 1712120 19720498 ~ 19721737 (-) False ankar
TU107092 other upstream 273010 21709288 ~ 21726820 (-) True G72363
XR_006251764.1 other upstream 735185 22171463 ~ 22223667 (-) False cerkl
TU107316 other upstream 862894 22299172 ~ 22307013 (-) False LOC122351746
TU107329 other upstream 1023118 22459396 ~ 22511307 (-) False LOC122351746
TU107929 other upstream 2493929 23930207 ~ 23931329 (-) True G72930

Expression Profile