RNA id: TU106983


Basic Information

Item Value
RNA id TU106983
length 7627
lncRNA type inter_gene
GC content 0.41
exon number 3
gene id G72260
representative False

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 21607794 ~ 21615684 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTTTAGACTTATAGACACCTGGAAAAGTGGATACATTTTCTCTGGCCACAGTTAGCCATTATTCAGTAAGTTCAATTTACCTACCTTATTCACTTTATATCCTCTTTCATAAGCTtagtgtgcttttaaaaatataaaacatctagGCCCTGATTGTGTCAAGTGTTTTTTAGTTGTAGAATGTATTTCCTTCATGCACAGTTTGAGTTTGATCTGTGTCATGCCTCAATCTTATTCCAacctttctcaaaacaaattTCCTGTCTATATTCCACAAACTGATTtactattttcttattttttcaatCTTTGCCATAATTAAATGCCAATCACTAAGACCACTGAATAAAAACGAGACAAAATGTAGTGCTGAGAACATGCTTTATTGAATCATTAATACTCAAGGAGGTTGCATAAATAGATAATACTACAATTCTACATAAAGTCAAACCAAATTGTAGGGCATTTAGATACTAAACCGTTTCTTTCCCAATGCACAGCAGGTGGTGTTGCTGTGGCACACTTTCTTGATGTTTGCCCAACATCTGGTGAATTCTAAGgctaacacacaaacacacaatgcttCAAAGCAAACCTCCAAGAGGAGGCTCTGCTTCTGCAAGGAAGTACAAGATATACTTTCCTTATTGGCCAGGAGATGTTAATTTTGAAAGTTTATTCAAGCAGTCCCTTGCCAGAAACAGagcacattaaacatttttgctcATAAAGTGCAGGCCGCTCGCACCTTGAGCATGTCATTAAAATGGTTGTATGACATAGTCAGTCTGAACACAAGGCCTAGTCGCCCTGCTTACATGAGGGTAAAATGTAAACAGCACTCAAGGCCTTACGTTCAAGTAACAATGCATAAGAGTATGGTTATAATATCACTGCACGTATAAAAATGCAGGTATAACTTAGTCTCTCAGATTTAGTGTAACGTCAACAGGGAGCCTCTCTACCTGCTGAGGCAATCTTAAGACTTCAACTTATTGTTGAGGCACAGAGTTTAGTTTCAGGTTTATCAAGGTATTCGTTCCATGTGAAACTTTCTCCTGATAAACATTTAGTTCCATTTGTTTCAgttaatattgttataaataacaatTCATACATTTTCCATAACCGTTAAATTCGGCTATATACATTATGTACATGTCACAGAAAAATGGATCAAAAATCCTAAGTCATAATTATCCAATAtggcatattttataataactttagACTTTAGTCTAGTTTGGCATAAATTAATGTCAAGTTTggtataaaaatagtttatatttacAGGAACAGATATCCAGGTAtttatcaagattttttttctgctcatttaataaatacaacgTCGCTTAATAGAGGAAGGGGTGGGGGTAGAAATTATGGCTTTACTTTGATCGAATGCTGATGGTTACAGTTGCCATGTCAGATCCATGCTCATTGGAAAGTTTGAGTGTGTATGCCCCAGCATCACTCTCTTTTACACCAGTGATGATGAGTGTAGTTAGGTCCTCTGTGGTCTCAATATGGAACCTACTGCTATCTTCCTCACTAGGCAGCTTTTTTCCACCACGTGACCACTCAATACGAGGTGCTGGCTCTCCAGAGAAAGCACAGGCCACTGTTAGAACCTTTCCAGTTTCAATGCTGATATCTTCAGGAAGAGCTTCAACATGTGAATGACTTGACATTATACTGCTTGAGCTCATGGCATATACTGACTCCGATGTCATAGAGGACATGCTAGACATTGACATAGTTTCAAATTTCATCTCAGCCATTGAAGAACTGCTAAAGGATGCCTCTTGCATTGTGCTCTCCATGTGGATGGATTTAGAAGAAAAACTTTCAAGCATACTGCTAGCAGCTGCACTTTCCCTTTTAAGAATCATTTCACCTGCCCCACGTATTTGGGATGAAGTGGattctgAATTGCCTTTTGTGTAGCCACGAATGCAGCAACTTTTGTGTAGACTGCTTGAAACACTTGACCAACAAAAGAGAATGATATTCTTGACACTGCTGCTCCTTCACTTATGATTTCACAGAAGTATTCCCCTTGGTCGCTCTCTGAAACATCAGATATATAGAGACAGCAAGTTCCATCTGCGGATGACTGAATCTGGTAGCGACTACTTTGACTCAGTTTCCTGCTATCCTTGTACCACACAACTTCTCTTACTGAACTCTCAGCAACAAAAATCATCTTGATTTTGTCTTCATAAGCTTCAGCTTTGAGTTGCTGGATGATCTTTGGTGGTGCTTCCTTTGAGGGGGTTGGGGATTTTACTGTAAGTGGAGATTTAACTCTTTTAGGTGACAGGATAGGCTCAGGAGATTTGACTGTTGGTGGGGATTTGGCTCTCTGAGGTTCAGGAGATTTAGGTCCTATAGGGGATTTAACTCTCAGAGGTGATGCAGCTGGCTCAGGAGACTTGATTGGAGGTGGGGATTTTACCCTGGGAGGTGAGGCTATAGGCTCAGGAGACTTCAGGGCTGTCGGAGACTTCACTCTTTGAGGGGTGGTTGGTTCAGGAGACTTAATAGGAGTTGGAGACTTTACCCTCTGAAGAGTGGTGGCTGGTTCTGGTGACTTCACTTTGAATGGGGATTTGACACCCTCTGGAGATTTCATTCGAGGTTCAGGAGACTTGACACCAGTGGGTTCTGGTGTTTTAATTTGGGGTTCTGGAGACTTAACTGAGGGAACAGGAGACTTTACTGCAGGCTCTGGTGATTTTACAGATGGCACTGGGGATTTCACCAAGGGCTCTGGGGACTTTACTGATGGCACTGGAGATGCAACTGATGGCTCTGGTGATTTAACTGATGGCACTGGAGATGTCACTGAGGGTTCTGGTGACTTCACTTGTGTAGTTGTAACTTCCTCAATTATTTGTTTACGAATAGTTAAAGTAAACCTTGCCTCTTGTTTTCCTACTGAATTTTCTACAACTACAGTGTAACTGCCTTCATCTGAATGCTCAACTGACGAAATTTCAAATGTGGACTTATACTGTGTTGTAGACACATGAATACGGTGTGAAGAGGCAATTGTTCTTCCCTCATGCATCCATGTAACACTTGGTGCTGGCTCGCCATCAATATCACAGACAAATCTTGCAGAGTCACCCTCAGATACAGTCAGAGACTGTGGCTTTGTGAGTATTTTGGCGGAAAGAGTGGCTTTAACTTTCTTTACTGATACTTCAGATGTTGTTTCTGATTCTTTTATCTTTGATTCAGATGACACACGTTTTTCAGTTGTATGTCTTTCAGAGGATGAATACGAAGCTGATGACAGGTATTCAGTGGATGCATATCTAATTGGAGATGATGCAAGCTTCTGTGATTCATACTTTTCAAAGGCAGAAACTTCATGTTTCTCTGTCaattttgttttggtttctttgATCTCCAAGTGAGTTCTTGAGGCAGAGGATGCTCGGATTGTTGTTGAATGATAATAATCAGTTTTTGTTATATCAGGCACAAATGGTGTTGGAGCCTCTTCATCTCGACGTCTTGAAGAGTATGTAGTAAACGCTCCACCTGAAACATCAAGAGTTCCATAGTCTGATGCCTCCCCCTTTGAATTTGTGCACACAGCACGATATGTGCCACTATCCTCTTCCTGACAGTGATTAATTTGAAGAGTCAGGACTCCACTCATATTTGTGAACTGGTATTTGCTGCTCTCTTGTATTTGTTGTCCGTTATGGAACCACTGGATATCAGCATCTGGCTTTGATTGAACATTCAAAGTGAATTTAGTGTTTTGTCCACATGGTACACGGTGAGAACGCATTCTTACTGTTATACGTGGAGCATGGTCAAGACTGAAGGGTTGCTGTGTCACAACCTGATACGTGCGTTCAGATTTGAGAGCTGCTTTTCTTGCTTCATATCTAGACATGATGTCAAATCTTGTAGACCTTTCAAATCTAGAGGAGGATCTGGAAGATCGTCTCTCAGTTGACACAGGACTTGGTGATCGAGGACGTGTCCTCTCAGGGGTGGGTGATCTTCTTTCAATGATTTCAACTTCAGCCTCTGTTGAAATGTGTGTACGAGGTTGTCTGATGAGTTCAGAGACAGGGCGCATCAGTTCAATGTATGTTGGAGACAATGATCTCCTCCTTCTCATGAAATGTGAAATGGGAGGAGGAGAACCTCGAGCTTTCTCAGTTGTTGTTACATGTCTTGTTTCTTCTACGTGTCTCACTTCAGTTTTGTGAACAGGTCTCGGTGAGGTATGACGCAGTGCAGAAAGCTCAAAGCGAACAGGGCTTCCCATGGGTGGGGAGGCAGAGAAGCCAAGTTCTAGTTCTTCTTCAAGCTCTTGCCTTTCTTTTTCAGttctcttcagtgtcacatagtCCTCACCCTCGAGGAGCTCCTCATCTGAAAGATCTCCTAGTGAACGTCTTCTCAGCCTGAATGAAGCCTCTGACTCGGGGGATGGTGATCTTCTTGCTGGTCGAACAGTCTCTAGATCATCCTGTGTGAGTTTTGGAATGCGCCATTTTGGTCTGTACTGATCGGTTATTCTAGGCAATGGCATGACATAAAACTGCTCCCATCTGGAAAGACGAATACGCCTCTGTCTCTTCTGGACAATTCTTTCCATTCTCTCAGGAATCTCAAACTGATCACGTAGTTTCTTGTACCATTTCATGTCAGATAGGGGCACAAAGTGCTTGATCAACTTATCTTCACTAAGGACTGTAAGATCACGTGCACGAGCTTCAGGGATTTCGTAAGGCATACGTatcttcttttcttcctcttttattttctttatttcttgatCCTCTTTATCAGAGATGTCAAACTCACCCTGCACATTTTTGGTGCTGACTGCAGGTTTATATAATTCAGCAGCCTCTTTCAAAGCTTCTTGTGCTACGGGGTTAAGTGTAACAACCTCTGctgttgaaaactgttgtgcCATTTTCAGTGTCTTTTCTATTTGGTTCGTTACATATTTCTGCCTCTCTTCCTCACTCTTAAACTCCCTCCTTGTATATGTCAGGCGTTCAACCTTGAGAGTAGCTTGACAACTTACTGATCCAGCTGTATTTGTTGCTGTGACTCTGTATGTGCCTGAATCCTCTATGAGGGTTTCTCTGATATGTAAAACGTGATGCTCTACATCCTCTTGAACGACTTCAACTTGTGGTCTGAACTCAAGAGGTTTACCATTTTTCTCCCATTTTAGAGTTGGCGCTGGGGTTCCTGATACTCTCAAGTCAAAGCGGACACTCTGACCCTCAACACACTCAATGTTAGCTAAGAGACGTTTAAACATTGGTCTCATAGTGTCCTCTGGAACAACATGTGGTGTTACAGTAAGACGAGCCTTGCAGCTGTCCTCACCAAACTTGTTGTTTGCCACGACAGTGTATTCAGCATCATCACTTAGGTCGACATTGTGTATCATGAGTTGATAAAGACCCTTGTCACTTgtgaatgtgtattttttagaATCTGGTTTGATTCTGTGCCCGGCCTTTAACCATGTAACACTCGGCTCTGGATGGACTGTAATCGTTACACCAAAGCGCACATCTTCACCAATGTATGCTGCACGGTTGTATAATGGCAAAGTAAACTCAGGTGGCCTCTgcaaaatttttgttttgtcaattCTACGCCTTGGTTTCTTGAGCGAGCGTCCCAGATAGTATTCTTGGTGAGACCTCACAGTCTCAACAAACAACTCAGCGTATGCACTGTCCTCCCTGTCTTCACTGACAGCCTTGCATCTATATAATCCATCGTCACATTCTTCAATGTCTTTAACATAGATGCTAGCTACTCCATTTGCATAATTGATTTCATATTTGTGGCTTGCAGTCAGTTTACGGGAACCAAAGTACCAGGTCACTTCGGTGTTTCTGTCATAGTTCTCAAGGCAGCACACAAACCTGACATGTCCTCCCTCTTCAGCAGAGCCATGCATGACAGGACCTGCTCTCAAGCCTTGTTCAGGATGCCCAACCTTCACTCTGCCAATTGAAACATTTCTCTGGTTTCTGTAACCACCACCATAGGCAATACGAGCTGCTGAAATAACAGCACTCCATTCCTTTTTCACCAGCGATTGGTAGTATCTTCTGTGTCTCAAAGTCTTAATGACCTTTGAACTAACATGTTCCAATTTCATCTTAAGCCAAGGGTGCTCCAAAGCTTCAGAGGCAGTCATACGTAGTTTGCGGTCTTTAGTCAGCAGTCTGTCGACAAAGTCCATACCCTCAATGCTGGTCTCTTTAAAGGCTTCGCTGTCAAAAACATACTCTGCATTTGAAATGTGCTCAACCATTTTCTGGTGTGATTCAGCAGCAAATGGATTAAGTCCACCAAGTAGGACATATGCAAGAACACCTACAGACCACATGTCAGTGGCAGTGGTGACGAAATCACTGTTGTGGATTTCAGGTGCACAGTACTCAGGGGCAGTGAACTGAATCCTAATGTTTTCTCCAGGTGTAAGCAACCTAGCTTGTCCCATTTCAATTATCTTGATTGTACTACTCTTTCTTGTAGAATAAACAATGTTATCAGGTCTGATATCAAAATGACAGTAGTTGAGACTGTGCAAGAACTTTAGGGCGCCACACACTTGTCTCATATACCGAACAATTTCTTGCTCTGTAAGGTCAAAGTTTGTACCAAGACGCTCAAAGATGTCCATACCAGATATGAATTCATAGATAAGGACGTATTCTTCTAGGCTATCAAAGGATTCATGAagataaacaatgtttttatgtCTTGCAATGTTGAGTGTCTCAATTTCTCTTGCAACCAGCTCTCGATCAGCACCTTTAACTTTGATGAATTTTGCCAAGAATGTCTTCTTGGAGCTAATTTCTATACAGCGATGTGCGATGCCAAACTGTCCATTGCGTGCAAGTTCCTCAGAGATTGTGTACAGAGATTGCAGATGTTTGACTTTTGAATGTGGCGCCTCCTCCTTTGTAATCTCTCTTGTTTCATCCACTTCCTCATCATAGTTTCGAATTGCTAACTTGTCTTCTTTCGTTGTCACAGGATCAGTTGGCACAGATGGAGAACTCAAGCCAAACTGATTTTCTGCAATCACACGGAACTGATATTTTGTTTTGCCAAAGAGGCTCATCACAGTGTATTGGGTCTCAGATGTCTGAGCAACACGAATCCATCTGTCTCCAGTGGTTGGGCACTTTTCTATAATGTAATTGATAATTTCACTTCCTCCATCATTTCCAGGACTCCAAGTGAGGGTGAGTGTATCTCTACCAATATCACtgactttaatattttttggtgCATCAGGGACATCAGCAACAGCAAGTTCAACAGTCTGTTTATCCACACCAAATCGATTTTTGGCACAAATGATGTAATAGCCTGAATCCTTCCTTTGTACTCCCTTAAGGAACACAAGGGAGGTGAATGATCTTGTTATAATTACTTGATGATAagctgtattattaattatctcTTGTCCCTTTTGCCATGTCACAACAGGATCAGGTTTGCCACTAATTGGAATTTTAATGGTAACTACTTCACCACGAATGGCATGAACAGCTCCCATTCCTTGAAGATGTAATGGCAAGTGAATCTTGGCAggaac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU106716 lncRNA downstream 171516 21433857 ~ 21436278 (-) True G72026
TU106713 lncRNA downstream 177453 21429128 ~ 21430341 (-) True G72024
TU106671 lncRNA downstream 362009 21234579 ~ 21245785 (-) False LOC122351567
XR_006251774.1 lncRNA downstream 362032 21233186 ~ 21245762 (-) True LOC122351567
TU106668 lncRNA downstream 401032 21206215 ~ 21206762 (-) True G71984
TU107104 lncRNA upstream 116624 21732308 ~ 21732996 (-) True G72372
TU107110 lncRNA upstream 120757 21736441 ~ 21737522 (-) True G72377
TU107242 lncRNA upstream 291315 21906999 ~ 21907385 (-) True G72474
TU107247 lncRNA upstream 326883 21942567 ~ 21942990 (-) True G72479
TU107240 lncRNA upstream 380251 21995935 ~ 22055031 (-) False G72472
XM_043249014.1 mRNA downstream 437019 21168939 ~ 21170775 (-) True LOC122351741
XM_043249011.1 mRNA downstream 836641 20769745 ~ 20771153 (-) True LOC122351738
XM_043249010.1 mRNA downstream 846767 20760046 ~ 20761027 (-) True LOC122351733
XM_043249009.1 mRNA downstream 850681 20755896 ~ 20757113 (-) True LOC122351732
XM_043248709.1 mRNA downstream 854814 20751269 ~ 20752980 (-) True LOC122351558
XM_043248710.1 mRNA upstream 128359 21744043 ~ 21896047 (-) True LOC122351560
XM_043249016.1 mRNA upstream 281501 21897185 ~ 21907713 (-) True LOC122351744
XM_043248643.1 mRNA upstream 555779 22171463 ~ 22223666 (-) True cerkl
XM_043248644.1 mRNA upstream 609874 22225558 ~ 22228499 (-) True neurod1
XM_043249520.1 mRNA upstream 725724 22341408 ~ 22398653 (-) True LOC122352034
TU106614 other downstream 1103904 20489164 ~ 20503890 (-) False G71938
TU106615 other downstream 1103904 20489164 ~ 20503890 (-) True G71938
XR_006251780.1 other downstream 1714479 19881824 ~ 19893315 (-) False mfsd6b
TU106134 other downstream 1803195 19796257 ~ 19804599 (-) False glsb
TU106113 other downstream 1886057 19720498 ~ 19721737 (-) False ankar
TU107092 other upstream 93604 21709288 ~ 21726820 (-) True G72363
XR_006251764.1 other upstream 555779 22171463 ~ 22223667 (-) False cerkl
TU107316 other upstream 683488 22299172 ~ 22307013 (-) False LOC122351746
TU107329 other upstream 843712 22459396 ~ 22511307 (-) False LOC122351746
TU107929 other upstream 2314523 23930207 ~ 23931329 (-) True G72930

Expression Profile