RNA id: TU107247



Basic Information


Item Value
RNA id TU107247
length 424
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G72479
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 21942567 ~ 21942990 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AATGAGCCAGGGTCATATTTGATTTGAGCGGGAGCCTTGCAGACCAATCTATCAACCTCTGTGATGTGTAACATTAGTTTAAAGCCCTCATGGCCTCAAGAAGCTGAACGCTGGGTGTGAAGGATTAAAGACGGCCTCTTATTAAAGAGCTCATCTTCAAGAGAGGCCATTCAAGCACTGGACCCGTAAGCaggatttatttaatgaattttaaatggcTGCTGTCAAATGAACAAGTAAATATACAAGCAAAAGAATGAAATAGAGCACGCTCTGGCTCTGGCAAGgtgaacaaatattaaattctgAACAAAgatgcatataataaaataaaaataaaataaaacagtcttGTGCTACCCcatatatttttagtaacaaatcatttgatcatttcaatcaatcaaaatgaATGTATGAAAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU107242 lncRNA downstream 35182 21906999 ~ 21907385 (-) True G72474
TU107110 lncRNA downstream 205045 21736441 ~ 21737522 (-) True G72377
TU107104 lncRNA downstream 209571 21732308 ~ 21732996 (-) True G72372
TU106979 lncRNA downstream 326883 21607794 ~ 21615684 (-) False G72260
TU107240 lncRNA upstream 52945 21995935 ~ 22055031 (-) False G72472
TU107238 lncRNA upstream 88147 22031137 ~ 22055031 (-) False G72472
TU107239 lncRNA upstream 111024 22054014 ~ 22056835 (-) True G72472
TU107261 lncRNA upstream 157036 22100026 ~ 22100238 (-) True G72493
TU107268 lncRNA upstream 180200 22123190 ~ 22123408 (-) True G72500
XM_043249016.1 mRNA downstream 34854 21897185 ~ 21907713 (-) True LOC122351744
XM_043248710.1 mRNA downstream 46520 21744043 ~ 21896047 (-) True LOC122351560
XM_043249014.1 mRNA downstream 771792 21168939 ~ 21170775 (-) True LOC122351741
XM_043249011.1 mRNA downstream 1171414 20769745 ~ 20771153 (-) True LOC122351738
XM_043249010.1 mRNA downstream 1181540 20760046 ~ 20761027 (-) True LOC122351733
XM_043248643.1 mRNA upstream 228473 22171463 ~ 22223666 (-) True cerkl
XM_043248644.1 mRNA upstream 282568 22225558 ~ 22228499 (-) True neurod1
XM_043249520.1 mRNA upstream 398418 22341408 ~ 22398653 (-) True LOC122352034
XM_043249018.1 mRNA upstream 503403 22446393 ~ 22510524 (-) True LOC122351746
XM_043249180.1 mRNA upstream 539236 22482226 ~ 22484709 (-) True LOC122351832
TU107092 other downstream 215747 21709288 ~ 21726820 (-) True G72363
TU106614 other downstream 1438677 20489164 ~ 20503890 (-) False G71938
TU106615 other downstream 1438677 20489164 ~ 20503890 (-) True G71938
XR_006251780.1 other downstream 2049252 19881824 ~ 19893315 (-) False mfsd6b
TU106134 other downstream 2137968 19796257 ~ 19804599 (-) False glsb
XR_006251764.1 other upstream 228473 22171463 ~ 22223667 (-) False cerkl
TU107316 other upstream 356182 22299172 ~ 22307013 (-) False LOC122351746
TU107329 other upstream 516406 22459396 ~ 22511307 (-) False LOC122351746
TU107929 other upstream 1987217 23930207 ~ 23931329 (-) True G72930
TU107931 other upstream 2013229 23956219 ~ 23960325 (-) False grb14

Expression Profile