RNA id: TU107440



Basic Information


Item Value
RNA id TU107440
length 215
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G72608
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 22666897 ~ 22667111 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gaaaaaaaatatccttTGATCAATCCCTtgataaaaacttattttaaaatattgttattttttcattcatatagGAATCCTGACAACAAGTATCATaaatgcctgtgtgtgtgtgtgtgtgtgtgtttgtaaatgcCTATTTCAGACATATCAAAACACTGGATGATACAGGAGTGAATGGTTTCTGTTAGGCCCAGACTGTTTTTCAGTCCCAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU107432 lncRNA downstream 8069 22658317 ~ 22658828 (-) True G72603
TU107436 lncRNA downstream 13322 22652502 ~ 22653575 (-) True G72605
XR_006251847.1 lncRNA downstream 78646 22585744 ~ 22588251 (-) True LOC122352087
TU107400 lncRNA downstream 86125 22579803 ~ 22580772 (-) True G72583
TU107338 lncRNA downstream 208139 22311078 ~ 22458758 (-) True G72535
TU107450 lncRNA upstream 33618 22700729 ~ 22701019 (-) True G72615
TU107487 lncRNA upstream 160987 22828098 ~ 22891619 (-) True G72646
TU107661 lncRNA upstream 274704 22941815 ~ 22942016 (-) True G72780
TU107677 lncRNA upstream 336286 23003397 ~ 23003740 (-) True G72795
TU107687 lncRNA upstream 588967 23256078 ~ 23277786 (-) True G72803
XM_043249090.1 mRNA downstream 21150 22636895 ~ 22645747 (-) True itgb2
XM_043249493.1 mRNA downstream 30900 22622058 ~ 22635997 (-) False vil1
XM_043249492.1 mRNA downstream 32911 22622058 ~ 22633986 (-) True vil1
XM_043249032.1 mRNA downstream 46109 22616864 ~ 22620788 (-) False LOC122351761
XM_043248246.1 mRNA upstream 235337 22902448 ~ 22906312 (-) True agr1
XM_043249636.1 mRNA upstream 338727 23005838 ~ 23244247 (-) True hdac4
XM_043249637.1 mRNA upstream 338727 23005838 ~ 23111800 (-) False hdac4
XM_043249638.1 mRNA upstream 338727 23005838 ~ 23111599 (-) False hdac4
XM_043249532.1 mRNA upstream 614403 23281514 ~ 23290139 (-) True LOC122352042
TU107329 other downstream 155590 22459396 ~ 22511307 (-) False LOC122351746
TU107316 other downstream 359884 22299172 ~ 22307013 (-) False LOC122351746
XR_006251764.1 other downstream 443230 22171463 ~ 22223667 (-) False cerkl
TU107092 other downstream 940077 21709288 ~ 21726820 (-) True G72363
TU106615 other downstream 2163007 20489164 ~ 20503890 (-) True G71938
TU107929 other upstream 1263096 23930207 ~ 23931329 (-) True G72930
TU107931 other upstream 1289108 23956219 ~ 23960325 (-) False grb14
TU108001 other upstream 1553411 24220522 ~ 24280708 (-) False G72978
TU108002 other upstream 1564124 24231235 ~ 24280708 (-) False G72978
TU108000 other upstream 1604344 24271455 ~ 24280708 (-) True G72978

Expression Profile