Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_006251832.1 |
| length | 800 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 3 |
| gene id | LOC122352044 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056707.1 |
| NCBI id | CM032076.1 |
| chromosome length | 26426558 |
| location | 23308487 ~ 23350941 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU107687 | lncRNA | downstream | 53495 | 23256078 ~ 23277786 (-) | True | G72803 |
| TU107694 | lncRNA | downstream | 59762 | 23271094 ~ 23271519 (-) | True | G72809 |
| TU107693 | lncRNA | downstream | 62517 | 23268321 ~ 23268764 (-) | True | G72808 |
| TU107677 | lncRNA | downstream | 327541 | 23003397 ~ 23003740 (-) | True | G72795 |
| TU107661 | lncRNA | downstream | 389265 | 22941815 ~ 22942016 (-) | True | G72780 |
| XR_006251833.1 | lncRNA | upstream | 10071 | 23361012 ~ 23380056 (-) | False | LOC122352045 |
| XR_006251834.1 | lncRNA | upstream | 10071 | 23361012 ~ 23377877 (-) | False | LOC122352045 |
| XR_006251835.1 | lncRNA | upstream | 10071 | 23361012 ~ 23365250 (-) | True | LOC122352045 |
| XR_006251836.1 | lncRNA | upstream | 29217 | 23380158 ~ 23387077 (-) | True | LOC122352046 |
| TU107858 | lncRNA | upstream | 83235 | 23434176 ~ 23434476 (-) | True | G72881 |
| XM_043249532.1 | mRNA | downstream | 41142 | 23281514 ~ 23290139 (-) | True | LOC122352042 |
| XM_043249636.1 | mRNA | downstream | 87034 | 23005838 ~ 23244247 (-) | True | hdac4 |
| XM_043249637.1 | mRNA | downstream | 219481 | 23005838 ~ 23111800 (-) | False | hdac4 |
| XM_043249638.1 | mRNA | downstream | 219682 | 23005838 ~ 23111599 (-) | False | hdac4 |
| XM_043248246.1 | mRNA | downstream | 424969 | 22902448 ~ 22906312 (-) | True | agr1 |
| XM_043249020.1 | mRNA | upstream | 39751 | 23390692 ~ 23410990 (-) | True | LOC122351748 |
| XM_043249534.1 | mRNA | upstream | 68321 | 23419262 ~ 23426434 (-) | True | gjc4b |
| XM_043249535.1 | mRNA | upstream | 68321 | 23419262 ~ 23426000 (-) | False | gjc4b |
| XM_043249556.1 | mRNA | upstream | 213438 | 23564379 ~ 23649560 (-) | True | LOC122352061 |
| XM_043249021.1 | mRNA | upstream | 365168 | 23716109 ~ 23717055 (-) | True | LOC122351749 |
| TU107329 | other | downstream | 819974 | 22459396 ~ 22511307 (-) | False | LOC122351746 |
| TU107316 | other | downstream | 1024268 | 22299172 ~ 22307013 (-) | False | LOC122351746 |
| XR_006251764.1 | other | downstream | 1107614 | 22171463 ~ 22223667 (-) | False | cerkl |
| TU107092 | other | downstream | 1604461 | 21709288 ~ 21726820 (-) | True | G72363 |
| TU106615 | other | downstream | 2827391 | 20489164 ~ 20503890 (-) | True | G71938 |
| TU107929 | other | upstream | 579266 | 23930207 ~ 23931329 (-) | True | G72930 |
| TU107931 | other | upstream | 605278 | 23956219 ~ 23960325 (-) | False | grb14 |
| TU108001 | other | upstream | 869581 | 24220522 ~ 24280708 (-) | False | G72978 |
| TU108002 | other | upstream | 880294 | 24231235 ~ 24280708 (-) | False | G72978 |
| TU108000 | other | upstream | 920514 | 24271455 ~ 24280708 (-) | True | G72978 |
