RNA id: TU107928



Basic Information


Item Value
RNA id TU107928
length 689
lncRNA type sense_over
GC content 0.33
exon number 3
gene id G72929
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 23926223 ~ 23981238 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gatatataacaGTTCATATAAATCTGTATGTACATATTATTAATTAGGCATTTTCTGAGTCAGAGCAGGCACATGGAGATGAACTACAGCTGTggatttcttttaatttattctgcGTTTGgacaattatattaatattattttcccCCGTTAATACCCGTTACACCTTTTCCCTCCTAATAATTACAGCAGAGGTGCTTTTAACGCCGTCGTGTTTTAAAACGAATATTTTCGGGGGTCGCTTCGACGCGAATTACGtttatgaaatatgtaaatatgcagaTGTGAAAGAAAATGCTCTATGTCgaagtctttttttgttgtcgttgtttAAATTATTAGGCGTAGATCTGATTTATATCATTGTTAGCCGATGAAAAAAAGGTACTGAAACATCTTCAGTTCCACAAACCCCTCCTTCATTCCCTTTCAAAACATTAGTGCACAGTTGTGTTAATTACGGGCTGCAGTTATAATACGTTAATACTTTATGACATTGAAAgcccacaaaaaaacaactgatcGATCAAAGCTGTTGCTAAGACAGAAAACACTGGGCTTTTGATTAATTTCGAGGAGAATATACTGCTGTATTATATGTATGAACTCCGTTCTCCTctcttttttgtattaaaaacttttaaagttCGaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU107919 lncRNA downstream 12337 23912173 ~ 23913886 (-) True G72927
TU107908 lncRNA downstream 14187 23911453 ~ 23912036 (-) True G72923
TU107903 lncRNA downstream 292146 23558753 ~ 23634077 (-) True G72918
TU107885 lncRNA downstream 325331 23598987 ~ 23600892 (-) True G72904
TU107891 lncRNA downstream 386120 23537504 ~ 23540103 (-) True G72909
TU108005 lncRNA upstream 272124 24253362 ~ 24285690 (-) True G72980
TU108009 lncRNA upstream 300753 24281991 ~ 24284165 (-) True G72984
TU108125 lncRNA upstream 531856 24513094 ~ 24521308 (-) True G73077
TU108133 lncRNA upstream 583643 24564881 ~ 24571112 (-) True G73084
TU108266 lncRNA upstream 758088 24739326 ~ 24745938 (-) True G73160
XM_043249022.1 mRNA downstream 7571 23914681 ~ 23918652 (-) True LOC122351750
XM_043249021.1 mRNA downstream 209168 23716109 ~ 23717055 (-) True LOC122351749
XM_043249556.1 mRNA downstream 276663 23564379 ~ 23649560 (-) True LOC122352061
XM_043249534.1 mRNA downstream 499789 23419262 ~ 23426434 (-) True gjc4b
XM_043248989.1 mRNA upstream 732 23981970 ~ 24029114 (-) False cobll1b
XM_043248987.1 mRNA upstream 733 23981971 ~ 24029114 (-) True cobll1b
XM_043248988.1 mRNA upstream 734 23981972 ~ 24029114 (-) False cobll1b
XM_043248991.1 mRNA upstream 734 23981972 ~ 24010861 (-) False cobll1b
XM_043248990.1 mRNA upstream 734 23981972 ~ 24010861 (-) False cobll1b
TU107329 other downstream 1414916 22459396 ~ 22511307 (-) False LOC122351746
TU107316 other downstream 1619210 22299172 ~ 22307013 (-) False LOC122351746
XR_006251764.1 other downstream 1702556 22171463 ~ 22223667 (-) False cerkl
TU107092 other downstream 2199403 21709288 ~ 21726820 (-) True G72363
TU106615 other downstream 3422333 20489164 ~ 20503890 (-) True G71938
TU108001 other upstream 239284 24220522 ~ 24280708 (-) False G72978
TU108002 other upstream 249997 24231235 ~ 24280708 (-) False G72978
TU108000 other upstream 290217 24271455 ~ 24280708 (-) True G72978
TU108324 other upstream 1046347 25027585 ~ 25030965 (-) True G73201
TU108463 other upstream 1367540 25348778 ~ 25349640 (-) True G73301

Expression Profile